AT1G78960 (ATLUP2, LUP2)

Aliases : ATLUP2, LUP2

Description : lupeol synthase 2

Gene families : OG0000781 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000781_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G78960
Cluster	HCCA: Cluster_109

Target	Alias	Description	ECC score	Gene Family Method
AT1G66960	No alias	Terpenoid cyclases family protein	0.02	OrthoFinder output from all 47 species
AT1G78955	CAMS1	camelliol C synthase 1	0.05	OrthoFinder output from all 47 species
AT1G78970	LUP1, ATLUP1	lupeol synthase 1	0.1	OrthoFinder output from all 47 species
AT4G15370	PEN2, BARS1	baruol synthase 1	0.02	OrthoFinder output from all 47 species
AT5G42600	MRN1	marneral synthase	0.04	OrthoFinder output from all 47 species
AT5G48010	THAS1, THAS	thalianol synthase 1	0.04	OrthoFinder output from all 47 species
Aop_g03659	CAS1	EC_5.4 intramolecular transferase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g31791	CAS1	EC_5.4 intramolecular transferase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g38800	CAS1	EC_5.4 intramolecular transferase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001722001	LAS1	Cycloartenol synthase 2 OS=Betula platyphylla	0.01	OrthoFinder output from all 47 species
GSVIVT01021482001	CAMS1	Secondary metabolism.terpenoids.terpenoid...	0.03	OrthoFinder output from all 47 species
GSVIVT01021490001	CAMS1	Beta-amyrin synthase OS=Betula platyphylla	0.07	OrthoFinder output from all 47 species
GSVIVT01021494001	CAMS1	Secondary metabolism.terpenoids.terpenoid...	0.02	OrthoFinder output from all 47 species
GSVIVT01029467001	CAS1	Secondary metabolism.terpenoids.terpenoid...	0.07	OrthoFinder output from all 47 species
GSVIVT01029474001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.02	OrthoFinder output from all 47 species
GSVIVT01029481001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.08	OrthoFinder output from all 47 species
GSVIVT01029482001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.09	OrthoFinder output from all 47 species
GSVIVT01029488001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.06	OrthoFinder output from all 47 species
GSVIVT01029489001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.09	OrthoFinder output from all 47 species
GSVIVT01029490001	No alias	Beta-Amyrin Synthase 2 OS=Panax ginseng	0.04	OrthoFinder output from all 47 species
GSVIVT01029508001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.02	OrthoFinder output from all 47 species
GSVIVT01029509001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.02	OrthoFinder output from all 47 species
GSVIVT01029514001	CAS1	Secondary metabolism.terpenoids.terpenoid...	0.06	OrthoFinder output from all 47 species
GSVIVT01032217001	CAS1	Secondary metabolism.terpenoids.terpenoid...	0.08	OrthoFinder output from all 47 species
LOC_Os11g08569.1	CAS1, LOC_Os11g08569	triterpenoid synthase	0.06	OrthoFinder output from all 47 species
LOC_Os11g18194.1	CAS1, LOC_Os11g18194	triterpenoid synthase	0.02	OrthoFinder output from all 47 species
LOC_Os11g18340.1	LOC_Os11g18340	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os11g18366.2	CAS1, LOC_Os11g18366	triterpenoid synthase	0.03	OrthoFinder output from all 47 species
MA_10270015g0010	CAS1	triterpenoid synthase. cycloartenol synthase	0.04	OrthoFinder output from all 47 species
MA_354367g0010	CAS1	Cycloartenol synthase OS=Ricinus communis...	0.02	OrthoFinder output from all 47 species
Sam_g04482	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18660	No alias	EC_5.4 intramolecular transferase & original description: none	0.03	OrthoFinder output from all 47 species
Smo129950	CAS1	Secondary metabolism.terpenoids.terpenoid...	0.04	OrthoFinder output from all 47 species
Solyc04g070980.4.1	CAS1, Solyc04g070980	triterpenoid synthase. cycloartenol synthase	0.03	OrthoFinder output from all 47 species
Solyc05g047580.4.1	CAS1, Solyc05g047580	triterpenoid synthase	0.06	OrthoFinder output from all 47 species
Solyc12g006505.1.1	Solyc12g006505	triterpenoid synthase	0.03	OrthoFinder output from all 47 species
Solyc12g006530.2.1	Solyc12g006530	triterpenoid synthase	0.06	OrthoFinder output from all 47 species
Spa_g24672	CAS1	EC_5.4 intramolecular transferase & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g25536	CAS1	EC_5.4 intramolecular transferase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e013637_P003	CAS1, Zm00001e013637	triterpenoid synthase	0.01	OrthoFinder output from all 47 species
Zm00001e024463_P001	CAS1, Zm00001e024463	triterpenoid synthase	0.02	OrthoFinder output from all 47 species
Zm00001e025848_P001	CAS1, Zm00001e025848	Parkeol synthase OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006722	triterpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016104	triterpenoid biosynthetic process	IDA	Interproscan
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	None	Extended
BP	GO:0019742	pentacyclic triterpenoid metabolic process	None	Extended
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	IGI	Interproscan
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	ISS	Interproscan
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	RCA	Interproscan
MF	GO:0031559	oxidosqualene cyclase activity	None	Extended
MF	GO:0042299	lupeol synthase activity	IGI	Interproscan
MF	GO:0042300	beta-amyrin synthase activity	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	HCCA
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0004452	isopentenyl-diphosphate delta-isomerase activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005496	steroid binding	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006655	phosphatidylglycerol biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008142	oxysterol binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0009331	glycerol-3-phosphate dehydrogenase complex	IEP	HCCA
BP	GO:0009413	response to flooding	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0010143	cutin biosynthetic process	IEP	HCCA
BP	GO:0010166	wax metabolic process	IEP	HCCA
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016863	intramolecular oxidoreductase activity, transposing C=C bonds	IEP	HCCA
MF	GO:0018685	alkane 1-monooxygenase activity	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0019953	sexual reproduction	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032934	sterol binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0046471	phosphatidylglycerol metabolic process	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
MF	GO:0051119	sugar transmembrane transporter activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0052646	alditol phosphate metabolic process	IEP	HCCA
MF	GO:0052722	fatty acid in-chain hydroxylase activity	IEP	HCCA
MF	GO:0090447	glycerol-3-phosphate 2-O-acyltransferase activity	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:1901568	fatty acid derivative metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032696	SQ_cyclase_C	416	754
IPR032697	SQ_cyclase_N	100	405

External Links

No external refs found!

AT1G78960 (ATLUP2, LUP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation