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AT1G78760


Description : F-box/RNI-like superfamily protein


Gene families : OG0007014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78760

Target Alias Description ECC score Gene Family Method Actions
AT1G13780 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G32020 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT1G66640 No alias RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G78750 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G13985 FBD1 FBD-associated F-box protein 0.03 OrthoFinder output from all 47 species
AT5G18770 No alias F-box/FBD-like domains containing protein 0.04 OrthoFinder output from all 47 species
AT5G22670 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G22720 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G25850 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G27750 No alias F-box/FBD-like domains containing protein 0.04 OrthoFinder output from all 47 species
AT5G44950 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G44980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
MF GO:0008515 sucrose transmembrane transporter activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015154 disaccharide transmembrane transporter activity IEP HCCA
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP HCCA
BP GO:0015766 disaccharide transport IEP HCCA
BP GO:0015770 sucrose transport IEP HCCA
BP GO:0015772 oligosaccharide transport IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0032870 cellular response to hormone stimulus IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071215 cellular response to abscisic acid stimulus IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071396 cellular response to lipid IEP HCCA
BP GO:0071407 cellular response to organic cyclic compound IEP HCCA
BP GO:0071446 cellular response to salicylic acid stimulus IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071495 cellular response to endogenous stimulus IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0097306 cellular response to alcohol IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR006566 FBD 368 411
IPR001810 F-box_dom 17 53
No external refs found!