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AT1G78750


Description : F-box/RNI-like superfamily protein


Gene families : OG0007014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78750
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G32020 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT1G60400 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT1G69630 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G78760 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G23955 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 OrthoFinder output from all 47 species
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
AT5G22720 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G44940 No alias F-box/RNI-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.11 OrthoFinder output from all 47 species
AT5G53637 No alias No description available 0.06 OrthoFinder output from all 47 species
AT5G53640 No alias CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like... 0.03 OrthoFinder output from all 47 species
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 19 56
IPR013101 Leu-rich_rpt_2 175 200
IPR006566 FBD 383 426
No external refs found!