MA_99276g0010


Description : 25.1 C1-metabolism.glycine hydroxymethyltransferase Encodes a protein with serine hydroxymethyltransferase activity which is thought to be localized in the mitochondrial matrix. SHM2 expression fails to rescue the conditional lethal phenotype of the shm1-1 mutant, defective in SHM1. serine hydroxymethyltransferase 2 (SHM2)


Gene families : OG_01_0000425 (Gene family) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_99276g0010
Cluster HCCA cluster: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT4G37930 STM, SHM1, SHMT1 serine transhydroxymethyltransferase 1 0.09 Gene family
Cpa|evm.model.tig00001130.31 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
Cre16.g664550 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.01 Gene family
GSVIVT01003859001 No alias 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.04 Gene family
LOC_Os03g52840 Os03g0738400 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.04 Gene family
Smo270566 PACid_15421045 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.03 Gene family
Solyc02g091560.3.1 Solyc02g091560.3 25.1 C1-metabolism.glycine hydroxymethyltransferase... 0.06 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 30 307
No external refs found!