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  5. AT1G78150

AT1G78150


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78150

Target Alias Description ECC score Gene Family Method Actions
Adi_g060359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G018800.1 Ceric.07G018800 not classified & original description: pacid=50626140... 0.02 OrthoFinder output from all 47 species
Ceric.10G080700.1 Ceric.10G080700 not classified & original description: pacid=50612027... 0.04 OrthoFinder output from all 47 species
LOC_Os04g38310.1 LOC_Os04g38310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007936_P001 Zm00001e007936 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040993_P001 Zm00001e040993 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0010048 vernalization response RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010019 chloroplast-nucleus signaling pathway IEP HCCA
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
BP GO:0090056 regulation of chlorophyll metabolic process IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901402 negative regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901464 negative regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1902325 negative regulation of chlorophyll biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025131 DUF4057 3 272
No external refs found!