AT1G77940

Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Gene families : OG0000968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000968_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G77940

Target	Alias	Description	ECC score	Gene Family Method
Adi_g051341	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Aev_g44543	No alias	regulatory protein *(WAP) of SUN-WIP...	0.03	OrthoFinder output from all 47 species
Ala_g12139	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ala_g33421	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.11	OrthoFinder output from all 47 species
Aob_g03904	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g17201	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Aop_g23120	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Aop_g69765	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Ceric.21G027700.1	Ceric.21G027700	component *(eL30) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.31G042300.1	Ceric.31G042300	component *(eL30) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001164.6	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.15	OrthoFinder output from all 47 species
Cre10.g420750	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.16	OrthoFinder output from all 47 species
Dac_g42615	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Dcu_g06686	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
GSVIVT01022191001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.13	OrthoFinder output from all 47 species
GSVIVT01032102001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	OrthoFinder output from all 47 species
Gb_02409	No alias	component RPL30 of LSU proteome component	0.11	OrthoFinder output from all 47 species
Gb_13527	No alias	component RPL30 of LSU proteome component	0.05	OrthoFinder output from all 47 species
LOC_Os01g16890.1	LOC_Os01g16890	component RPL30 of LSU proteome component	0.08	OrthoFinder output from all 47 species
LOC_Os01g59730.1	LOC_Os01g59730	component RPL30 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os05g41110.1	LOC_Os05g41110	component RPL30 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Lfl_g14124	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Lfl_g21475	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Lfl_g32270	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
MA_6354g0010	No alias	component RPL30 of LSU proteome component	0.09	OrthoFinder output from all 47 species
Mp7g01690.1	No alias	component RPL30 of LSU proteome component	0.16	OrthoFinder output from all 47 species
Msp_g41110	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Pp3c12_9290V3.1	Pp3c12_9290	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	0.04	OrthoFinder output from all 47 species
Pp3c16_10400V3.1	Pp3c16_10400	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	0.08	OrthoFinder output from all 47 species
Pp3c25_9320V3.1	Pp3c25_9320	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	0.03	OrthoFinder output from all 47 species
Pp3c4_15480V3.1	Pp3c4_15480	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	0.09	OrthoFinder output from all 47 species
Ppi_g43418	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g52532	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g00684	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g11494	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g38074	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g41445	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g41910	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g42031	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Smo19071	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	OrthoFinder output from all 47 species
Solyc01g009100.4.1	Solyc01g009100	component RPL30 of LSU proteome component	0.09	OrthoFinder output from all 47 species
Solyc04g072660.4.1	Solyc04g072660	component RPL30 of LSU proteome component	0.17	OrthoFinder output from all 47 species
Solyc11g071490.2.1	Solyc11g071490	component RPL30 of LSU proteome component	0.13	OrthoFinder output from all 47 species
Spa_g00831	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Tin_g05827	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Zm00001e013242_P001	Zm00001e013242	component RPL30 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e031987_P001	Zm00001e031987	component RPL30 of LSU proteome component	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	ISS	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005840	ribosome	None	Extended
BP	GO:0006412	translation	ISS	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0022625	cytosolic large ribosomal subunit	IDA	Interproscan
CC	GO:0022626	cytosolic ribosome	IDA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0015935	small ribosomal subunit	IEP	HCCA
CC	GO:0022627	cytosolic small ribosomal subunit	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004038	Ribosomal_L7Ae/L30e/S12e/Gad45	14	105

External Links

No external refs found!

AT1G77940

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation