AT1G77130 (PGSIP2, GUX3)

Aliases : PGSIP2, GUX3

Description : plant glycogenin-like starch initiation protein 2

Gene families : OG0002672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002672_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G77130

Target	Alias	Description	ECC score	Gene Family Method
Cba_g62374	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.39G020600.1	PGSIP2, GUX3,...	glucuronosyltransferase *(GUX) & original description:...	0.03	OrthoFinder output from all 47 species
Gb_06192	PGSIP1, GUX1	glucuronosyltransferase (GUX)	0.02	OrthoFinder output from all 47 species
LOC_Os01g65780.2	PGSIP1, GUX1,...	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species
Sam_g16817	No alias	glucuronosyltransferase *(GUX) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e000623_P001	PGSIP3, GUX2,...	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species
Zm00001e014808_P002	PGSIP1, GUX1,...	glucuronosyltransferase (GUX)	0.02	OrthoFinder output from all 47 species
Zm00001e019071_P001	PGSIP1, GUX1,...	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	ISS	Interproscan
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009832	plant-type cell wall biogenesis	None	Extended
BP	GO:0009834	plant-type secondary cell wall biogenesis	IGI	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
MF	GO:0015020	glucuronosyltransferase activity	IDA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISS	Interproscan
MF	GO:0016758	hexosyltransferase activity	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	IDA	Interproscan
BP	GO:0045492	xylan biosynthetic process	IGI	Interproscan
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	HCCA
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
BP	GO:0007623	circadian rhythm	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0010029	regulation of seed germination	IEP	HCCA
MF	GO:0010174	nucleoside transmembrane transporter activity, against a concentration gradient	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0048511	rhythmic process	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:1900140	regulation of seedling development	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002495	Glyco_trans_8	292	394

External Links

No external refs found!

AT1G77130 (PGSIP2, GUX3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation