AT1G76380

Description : DNA-binding bromodomain-containing protein

Gene families : OG0001292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001292_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G76380

Target	Alias	Description	ECC score	Gene Family Method
Adi_g086887	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g57133	No alias	SMARCI component *(BRD) of SWI/SNF chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Aspi01Gene38130.t1	Aspi01Gene38130	SMARCI component *(BRD) of SWI/SNF chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Aspi01Gene71842.t1	Aspi01Gene71842	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g66228	No alias	SMARCI component *(BRD) of SWI/SNF chromatin remodeling...	0.02	OrthoFinder output from all 47 species
Pir_g38779	No alias	SMARCI component *(BRD) of SWI/SNF chromatin remodeling...	0.02	OrthoFinder output from all 47 species
Pir_g60712	No alias	SMARCI component *(BRD) of SWI/SNF chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Sam_g26218	No alias	transcriptional repressor *(AITR) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g082530.3.1	Solyc04g082530	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0030054	cell junction	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001487	Bromodomain	152	231

External Links

No external refs found!