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  5. AT1G75060

AT1G75060


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G75060
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Adi_g042772 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Adi_g077025 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Aev_g02770 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Cre01.g051450 No alias Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Dde_g06294 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
GSVIVT01019388001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
LOC_Os04g08450.3 LOC_Os04g08450 associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Lfl_g23067 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Solyc04g079930.3.1 Solyc04g079930 associated component SAP30 of histone deacetylase machineries 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0005539 glycosaminoglycan binding IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019985 translesion synthesis IEP HCCA
MF GO:0030337 DNA polymerase processivity factor activity IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
BP GO:0042276 error-prone translesion synthesis IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
MF GO:0042834 peptidoglycan binding IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0043530 adenosine 5'-monophosphoramidase activity IEP HCCA
MF GO:0047627 adenylylsulfatase activity IEP HCCA
MF GO:0047710 bis(5'-adenosyl)-triphosphatase activity IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 173 225
No external refs found!