AT1G74660 (MIF1)

Aliases : MIF1

Description : mini zinc finger 1

Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G74660

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00119p00074870	MIF2,...	RNA biosynthesis.transcriptional activation.HB...	0.05	OrthoFinder output from all 47 species
AT1G75240	AtHB33, ZHD5, HB33	homeobox protein 33	0.03	OrthoFinder output from all 47 species
AT3G28917	MIF2	mini zinc finger 2	0.04	OrthoFinder output from all 47 species
AT3G28920	HB34, ZHD9, AtHB34	homeobox protein 34	0.07	OrthoFinder output from all 47 species
AT5G39760	ZHD10, AtHB23, HB23	homeobox protein 23	0.04	OrthoFinder output from all 47 species
Aev_g03224	ATHB22, MEE68, ZHD2, HB22	zf-HD-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g48693	ATHB22, MEE68, ZHD2, HB22	zf-HD-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08968.t1	AtHB31, ZHD4,...	zf-HD-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene11171.t1	ATHB22, MEE68,...	zf-HD-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene59294.t2	ATHB22, MEE68,...	zf-HD-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene68410.t1	ATHB22, MEE68,...	zf-HD-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0047.g030326	ATHB22, MEE68, ZHD2, HB22	zf-HD-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Azfi_s0149.g053216	ATHB22, MEE68, ZHD2, HB22	zf-HD-type transcription factor & original description: CDS=1-636	0.03	OrthoFinder output from all 47 species
Cba_g09361	AtHB24, ZHD6, HB24	zf-HD-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g23511	ATHB22, MEE68, ZHD2, HB22	zf-HD-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.01G025400.1	AtHB31, ZHD4,...	zf-HD-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.02G068100.1	ATHB22, MEE68,...	zf-HD-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g13123	AtHB31, ZHD4, HB31	zf-HD-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10543	ATHB22, MEE68, ZHD2, HB22	zf-HD-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os03g50920.1	ATHB22, MEE68,...	transcription factor (zf-HD)	0.06	OrthoFinder output from all 47 species
LOC_Os04g35500.1	ATHB22, MEE68,...	transcription factor (zf-HD)	0.02	OrthoFinder output from all 47 species
LOC_Os09g24810.1	LOC_Os09g24810	transcription factor (zf-HD)	0.05	OrthoFinder output from all 47 species
LOC_Os12g03110.1	MIF2, LOC_Os12g03110	transcription factor (zf-HD)	0.03	OrthoFinder output from all 47 species
LOC_Os12g10630.1	AtHB31, ZHD4,...	transcription factor (zf-HD)	0.03	OrthoFinder output from all 47 species
MA_101972g0010	ATHB22, MEE68, ZHD2, HB22	transcription factor (zf-HD)	0.03	OrthoFinder output from all 47 species
MA_12314g0010	MIF2	transcription factor (zf-HD)	0.02	OrthoFinder output from all 47 species
MA_19630g0020	ATHB22, MEE68, ZHD2, HB22	transcription factor (zf-HD)	0.04	OrthoFinder output from all 47 species
MA_19630g0030	AtHB31, ZHD4, HB31	transcription factor (zf-HD)	0.04	OrthoFinder output from all 47 species
MA_32594g0010	MIF2	transcription factor (zf-HD)	0.02	OrthoFinder output from all 47 species
MA_453742g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Pp3c5_889V3.1	ZHD3, HB21,...	homeobox protein 21	0.02	OrthoFinder output from all 47 species
Ppi_g10930	AtHB31, ZHD4, HB31	zf-HD-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g18997	ATHB22, MEE68, ZHD2, HB22	zf-HD-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010602	AtHB31, ZHD4, HB31	zf-HD-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025357	ATHB22, MEE68, ZHD2, HB22	zf-HD-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Smo111756	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Smo59936	ATHB22, MEE68, ZHD2, HB22	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Solyc01g103830.1.1	AtHB24, ZHD6,...	transcription factor (zf-HD)	0.04	OrthoFinder output from all 47 species
Solyc01g150154.1.1	ATHB29, ZFHD1,...	transcription factor (zf-HD)	0.04	OrthoFinder output from all 47 species
Solyc01g150155.1.1	Solyc01g150155	transcription factor (zf-HD)	0.06	OrthoFinder output from all 47 species
Solyc03g116070.1.1	MIF3, Solyc03g116070	transcription factor (zf-HD)	0.07	OrthoFinder output from all 47 species
Solyc04g014260.2.1	ATHB22, MEE68,...	transcription factor (zf-HD)	0.02	OrthoFinder output from all 47 species
Zm00001e008082_P001	AtHB31, ZHD4,...	transcription factor (zf-HD)	0.02	OrthoFinder output from all 47 species
Zm00001e021292_P003	AtHB31, ZHD4,...	transcription factor (zf-HD)	0.03	OrthoFinder output from all 47 species
Zm00001e023331_P001	ATHB22, MEE68,...	transcription factor (zf-HD)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IDA	Interproscan
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007275	multicellular organism development	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009640	photomorphogenesis	IMP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009733	response to auxin	RCA	Interproscan
BP	GO:0009735	response to cytokinin	IMP	Interproscan
BP	GO:0009736	cytokinin-activated signaling pathway	RCA	Interproscan
BP	GO:0009737	response to abscisic acid	IMP	Interproscan
BP	GO:0009739	response to gibberellin	IMP	Interproscan
BP	GO:0009741	response to brassinosteroid	IMP	Interproscan
BP	GO:0009741	response to brassinosteroid	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016128	phytosteroid metabolic process	None	Extended
BP	GO:0016129	phytosteroid biosynthetic process	None	Extended
BP	GO:0016131	brassinosteroid metabolic process	None	Extended
BP	GO:0016132	brassinosteroid biosynthetic process	RCA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043392	negative regulation of DNA binding	IDA	Interproscan
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	IDA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048509	regulation of meristem development	IMP	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051098	regulation of binding	None	Extended
BP	GO:0051100	negative regulation of binding	None	Extended
BP	GO:0051101	regulation of DNA binding	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006456	ZF_HD_homeobox_Cys/His_dimer	36	89

External Links

No external refs found!

AT1G74660 (MIF1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation