AT1G73820

Description : Ssu72-like family protein

Gene families : OG0004613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004613_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G73820

Target	Alias	Description	ECC score	Gene Family Method
Ala_g01208	No alias	PTP phosphatase *(SSU72) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g05671	No alias	PTP phosphatase *(SSU72) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g06588	No alias	PTP phosphatase *(SSU72) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g38938	No alias	PTP phosphatase *(SSU72) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g11160	No alias	PTP phosphatase *(SSU72) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006470	protein dephosphorylation	RCA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016311	dephosphorylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000418	RNA polymerase IV complex	IEP	HCCA
CC	GO:0000419	RNA polymerase V complex	IEP	HCCA
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
BP	GO:0010426	DNA methylation on cytosine within a CHH sequence	IEP	HCCA
BP	GO:0016925	protein sumoylation	IEP	HCCA
BP	GO:0022403	cell cycle phase	IEP	HCCA
BP	GO:0030422	siRNA processing	IEP	HCCA
CC	GO:0030880	RNA polymerase complex	IEP	HCCA
MF	GO:0031386	protein tag	IEP	HCCA
BP	GO:0032776	DNA methylation on cytosine	IEP	HCCA
BP	GO:0043433	negative regulation of DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0044092	negative regulation of molecular function	IEP	HCCA
BP	GO:0044848	biological phase	IEP	HCCA
BP	GO:0051090	regulation of DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0051325	interphase	IEP	HCCA
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006811	RNA_pol_II_suA	4	193

External Links

No external refs found!