1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G73570

AT1G73570


Description : HCP-like superfamily protein


Gene families : OG0003345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003345_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G73570
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Adi_g024730 No alias component *(HRD3) of ER-associated protein degradation... 0.03 OrthoFinder output from all 47 species
Ala_g07807 No alias component *(HRD3) of ER-associated protein degradation... 0.02 OrthoFinder output from all 47 species
Dcu_g01889 No alias component *(HRD3) of ER-associated protein degradation... 0.03 OrthoFinder output from all 47 species
MA_10342253g0020 No alias ERAD-associated E3 ubiquitin-protein ligase component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000795 synaptonemal complex IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
InterPro domains Description Start Stop
IPR006597 Sel1-like 243 274
IPR006597 Sel1-like 463 486
IPR006597 Sel1-like 395 413
IPR006597 Sel1-like 498 529
IPR006597 Sel1-like 310 344
IPR006597 Sel1-like 350 380
IPR006597 Sel1-like 278 307
No external refs found!