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  5. AT1G72100

AT1G72100


Description : late embryogenesis abundant domain-containing protein / LEA domain-containing protein


Gene families : OG0001860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001860_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G72100
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0094.g043407 No alias not classified & original description: CDS=1-2121 0.08 OrthoFinder output from all 47 species
Ceric.06G034100.1 Ceric.06G034100 not classified & original description: pacid=50619971... 0.06 OrthoFinder output from all 47 species
Dac_g08104 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001769001 No alias No description available 0.23 OrthoFinder output from all 47 species
GSVIVT01001772001 No alias No description available 0.21 OrthoFinder output from all 47 species
GSVIVT01001776001 No alias No description available 0.17 OrthoFinder output from all 47 species
LOC_Os04g35490.1 LOC_Os04g35490 no hits & (original description: none) 0.18 OrthoFinder output from all 47 species
Mp1g01170.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g18411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60162 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g21982 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g26311 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440470 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc06g065050.2.1 Solyc06g065050 no hits & (original description: none) 0.29 OrthoFinder output from all 47 species
Solyc11g022530.3.1 Solyc11g022530 no hits & (original description: none) 0.23 OrthoFinder output from all 47 species
Zm00001e040896_P001 Zm00001e040896 no hits & (original description: none) 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009793 embryo development ending in seed dormancy ISS Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
MF GO:0008379 thioredoxin peroxidase activity IEP HCCA
MF GO:0008429 phosphatidylethanolamine binding IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010231 maintenance of seed dormancy IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0016595 glutamate binding IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
BP GO:0031407 oxylipin metabolic process IEP HCCA
BP GO:0031408 oxylipin biosynthetic process IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:0071614 linoleic acid epoxygenase activity IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0097437 maintenance of dormancy IEP HCCA
MF GO:0140824 thioredoxin-dependent peroxiredoxin activity IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR025423 DUF4149 318 418
No external refs found!