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  5. AT1G71740

AT1G71740


Description : unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G71740
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00160030 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00147p00067470 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G14760 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
Aev_g26467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42325 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g49384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02518 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g04337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g11950.1 LOC_Os02g11950 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
LOC_Os02g21640.1 LOC_Os02g21640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g23298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_194872g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_285165g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8718566g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g37384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g119810.1.1 Solyc03g119810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g19958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031031_P001 Zm00001e031031 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0007043 cell-cell junction assembly IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034329 cell junction assembly IEP HCCA
BP GO:0034330 cell junction organization IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045216 cell-cell junction organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048226 Casparian strip IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!