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  5. AT1G71060

AT1G71060


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G71060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00209480 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00022p00121040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g77360,... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00129420 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00130470 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49730... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00045650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g52640,... 0.07 OrthoFinder output from all 47 species
AMTR_s00105p00044870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g71060,... 0.04 OrthoFinder output from all 47 species
AMTR_s00119p00029960 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g15010,... 0.04 OrthoFinder output from all 47 species
AMTR_s00119p00084460 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27800,... 0.04 OrthoFinder output from all 47 species
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.05 OrthoFinder output from all 47 species
AMTR_s00142p00073110 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g73400,... 0.07 OrthoFinder output from all 47 species
AT1G55630 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G27800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G16010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G61360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g057762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06010 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.03 OrthoFinder output from all 47 species
Als_g01092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22080 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g04415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64236.t1 Aspi01Gene64236 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g10252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g58922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03049 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g03918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008815001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 OrthoFinder output from all 47 species
GSVIVT01015982001 No alias Pentatricopeptide repeat-containing protein At1g80880,... 0.05 OrthoFinder output from all 47 species
GSVIVT01017111001 No alias Pentatricopeptide repeat-containing protein At3g16010... 0.02 OrthoFinder output from all 47 species
GSVIVT01027388001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.03 OrthoFinder output from all 47 species
GSVIVT01029740001 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.03 OrthoFinder output from all 47 species
Gb_11871 No alias Pentatricopeptide repeat-containing protein At3g49730... 0.04 OrthoFinder output from all 47 species
Gb_12874 No alias Pentatricopeptide repeat-containing protein At3g61360... 0.03 OrthoFinder output from all 47 species
Gb_13617 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 OrthoFinder output from all 47 species
Gb_19758 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_20376 No alias group-II intron mitochondrial splicing factor (MISF68) 0.03 OrthoFinder output from all 47 species
LOC_Os04g55090.1 LOC_Os04g55090 Pentatricopeptide repeat-containing protein At1g80550,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28180.1 LOC_Os08g28180 Pentatricopeptide repeat-containing protein At2g13420,... 0.02 OrthoFinder output from all 47 species
Len_g19159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29766 OTP43 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432868g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_128052g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.04 OrthoFinder output from all 47 species
MA_387336g0010 No alias Pentatricopeptide repeat-containing protein At3g22670,... 0.04 OrthoFinder output from all 47 species
MA_455059g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8206159g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.03 OrthoFinder output from all 47 species
MA_933431g0010 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.02 OrthoFinder output from all 47 species
Msp_g08820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007283 No alias not classified & original description: CDS=1-1626 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014467 No alias not classified & original description: CDS=1-2058 0.03 OrthoFinder output from all 47 species
Sam_g17038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g116540.1.1 Solyc03g116540 Pentatricopeptide repeat-containing protein At1g52640,... 0.04 OrthoFinder output from all 47 species
Solyc04g081950.4.1 Solyc04g081950 Pentatricopeptide repeat-containing protein At1g20300,... 0.03 OrthoFinder output from all 47 species
Solyc11g071670.2.1 Solyc11g071670 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Tin_g04025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005446_P003 Zm00001e005446 group-II intron mitochondrial splicing factor (MISF68) 0.02 OrthoFinder output from all 47 species
Zm00001e006773_P001 Zm00001e006773 Pentatricopeptide repeat-containing protein At1g80550,... 0.04 OrthoFinder output from all 47 species
Zm00001e025816_P001 Zm00001e025816 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e026896_P001 Zm00001e026896 Pentatricopeptide repeat-containing protein At3g62470,... 0.04 OrthoFinder output from all 47 species
Zm00001e031478_P001 Zm00001e031478 Pentatricopeptide repeat-containing protein At3g62470,... 0.03 OrthoFinder output from all 47 species
Zm00001e036197_P001 Zm00001e036197 Pentatricopeptide repeat-containing protein At1g71060,... 0.02 OrthoFinder output from all 47 species
Zm00001e036305_P001 Zm00001e036305 Pentatricopeptide repeat-containing protein At3g25210,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009749 response to glucose IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 131 157
IPR002885 Pentatricopeptide_repeat 172 193
IPR002885 Pentatricopeptide_repeat 402 451
IPR002885 Pentatricopeptide_repeat 339 382
IPR002885 Pentatricopeptide_repeat 265 312
IPR002885 Pentatricopeptide_repeat 200 241
No external refs found!