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  5. AT1G70620

AT1G70620


Description : cyclin-related


Gene families : OG0005057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G70620
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00201740 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Azfi_s0477.g073034 No alias not classified & original description: CDS=1-2718 0.03 OrthoFinder output from all 47 species
Azfi_s1127.g097859 No alias not classified & original description: CDS=1-2784 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004630 phospholipase D activity IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009395 phospholipid catabolic process IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
CC GO:0016591 RNA polymerase II, holoenzyme IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR031937 PNISR 429 533
No external refs found!