AT1G70320 (UPL2)


Aliases : UPL2

Description : ubiquitin-protein ligase 2


Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G70320

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00211330 UPL1,... Protein degradation.peptide tagging.Ubiquitin... 0.1 OrthoFinder output from all 47 species
AMTR_s00061p00204480 UPL1 Protein degradation.peptide tagging.Ubiquitin... 0.14 OrthoFinder output from all 47 species
Adi_g016298 UPL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g026954 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g052147 UPL2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g077941 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g107378 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107426 UPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04900 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g16628 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.13 OrthoFinder output from all 47 species
Ala_g06583 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.15 OrthoFinder output from all 47 species
Ala_g06863 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.16 OrthoFinder output from all 47 species
Als_g14108 UPL1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g16302 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.12 OrthoFinder output from all 47 species
Als_g40877 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g10928 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27017 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g26360 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene08879.t1 UPL1, Aspi01Gene08879 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10347.t1 UPL1, Aspi01Gene10347 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0029.g024164 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=1-11178 0.09 OrthoFinder output from all 47 species
Azfi_s0087.g042300 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=382-11403 0.05 OrthoFinder output from all 47 species
Azfi_s0116.g046399 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=235-11562 0.13 OrthoFinder output from all 47 species
Cba_g36312 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.10G067500.1 UPL2, Ceric.10G067500 E3 ubiquitin ligase *(UPL1) & original description:... 0.12 OrthoFinder output from all 47 species
Ceric.29G011900.1 UPL1, Ceric.29G011900 E3 ubiquitin ligase *(UPL1) & original description:... 0.17 OrthoFinder output from all 47 species
Cre01.g012450 UPL1 Protein degradation.peptide tagging.Ubiquitin... 0.07 OrthoFinder output from all 47 species
Dac_g12923 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02070 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g12771 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.17 OrthoFinder output from all 47 species
Dde_g04957 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g21858 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05120 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10043 UPL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21297 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009206001 UPL2 Protein degradation.peptide tagging.Ubiquitin... 0.18 OrthoFinder output from all 47 species
GSVIVT01009208001 UPL2 E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
GSVIVT01014697001 UPL1 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
GSVIVT01014698001 UPL1 Protein degradation.peptide tagging.Ubiquitin... 0.1 OrthoFinder output from all 47 species
Gb_17424 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.13 OrthoFinder output from all 47 species
Gb_21632 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.1 OrthoFinder output from all 47 species
Gb_26784 UPL2 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Gb_26785 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
LOC_Os09g07900.1 UPL1, LOC_Os09g07900 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
LOC_Os12g24080.1 UPL2, LOC_Os12g24080 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Len_g22981 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g23822 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g05050 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g40796 UPL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_20049g0010 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.11 OrthoFinder output from all 47 species
MA_20049g0020 UPL1 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_7295g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_7295g0020 UPL2 E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_75734g0010 UPL1 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g21620.1 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.16 OrthoFinder output from all 47 species
Msp_g19139 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g48585 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13587 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15570 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g39369 UPL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44293 UPL2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g20483 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57729 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02429 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06511 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003603 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=387-11411 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022779 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=249-11528 0.04 OrthoFinder output from all 47 species
Sam_g40563 No alias E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo154179 UPL2 Protein degradation.peptide tagging.Ubiquitin... 0.09 OrthoFinder output from all 47 species
Solyc04g076620.4.1 UPL1, Solyc04g076620 monomeric E3 ubiquitin ligase (HECT) 0.15 OrthoFinder output from all 47 species
Solyc07g065630.4.1 UPL1, Solyc07g065630 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Spa_g17792 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g23911 UPL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g28076 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29717 UPL1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g33388 UPL2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g40173 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.13 OrthoFinder output from all 47 species
Spa_g45124 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52454 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21189 UPL1 E3 ubiquiTin ligase *(UPL1) & original description: none 0.11 OrthoFinder output from all 47 species
Zm00001e009321_P001 UPL1, Zm00001e009321 monomeric E3 ubiquitin ligase (HECT) 0.09 OrthoFinder output from all 47 species
Zm00001e017836_P002 UPL1, Zm00001e017836 monomeric E3 ubiquitin ligase (HECT) 0.15 OrthoFinder output from all 47 species
Zm00001e039654_P001 UPL1, Zm00001e039654 monomeric E3 ubiquitin ligase (HECT) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex ISS Interproscan
CC GO:0000151 ubiquitin ligase complex TAS Interproscan
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
MF GO:0004842 ubiquitin-protein transferase activity IBA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity TAS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
BP GO:0016567 protein ubiquitination ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005652 nuclear lamina IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009292 horizontal gene transfer IEP HCCA
BP GO:0009294 DNA-mediated transformation IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
CC GO:0032588 trans-Golgi network membrane IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
CC GO:0034399 nuclear periphery IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
MF GO:0042800 histone H3K4 methyltransferase activity IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048571 long-day photoperiodism IEP HCCA
BP GO:0048574 long-day photoperiodism, flowering IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:0140938 histone H3 methyltransferase activity IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR015940 UBA 1272 1309
IPR010309 E3_Ub_ligase_DUF908 85 203
IPR010309 E3_Ub_ligase_DUF908 201 356
IPR010314 E3_Ub_ligase_DUF913 416 764
IPR000569 HECT_dom 3347 3657
IPR025527 HUWE1/Rev1_UBM 2626 2656
IPR025527 HUWE1/Rev1_UBM 2587 2616
IPR025527 HUWE1/Rev1_UBM 2661 2693
No external refs found!