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AT1G70100


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24160.2); Has 3037 Blast hits to 2309 proteins in 344 species: Archae - 6; Bacteria - 672; Metazoa - 1089; Fungi - 230; Plants - 220; Viruses - 37; Other Eukaryotes - 783 (source: NCBI BLink).


Gene families : OG0003425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G70100
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Ehy_g14486 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g38612 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Solyc05g006490.4.1 Solyc05g006490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000304 response to singlet oxygen IEP HCCA
BP GO:0000373 Group II intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0036473 cell death in response to oxidative stress IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA

No InterPro domains available for this sequence

No external refs found!