AT1G69440 (AGO7, ZIP)

Aliases : AGO7, ZIP

Description : Argonaute family protein

Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G69440
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
Als_g07869	PNH, AGO10, ZLL	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g60456	AGO7, ZIP	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Azfi_s0074.g037328	AGO1	regulatory protein *(AGO7) of transacting siRNA pathway...	0.05	OrthoFinder output from all 47 species
Cba_g16425	AGO1	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.02	OrthoFinder output from all 47 species
Dcu_g13467	AGO1	regulatory protein *(AGO7) of transacting siRNA pathway...	0.02	OrthoFinder output from all 47 species
Dcu_g44557	AGO1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_34642	PNH, AGO10, ZLL	RIS-Complex miRNA recruiting factor (AGO1)	0.04	OrthoFinder output from all 47 species
LOC_Os06g51310.2	AGO1, LOC_Os06g51310	RIS-Complex miRNA recruiting factor (AGO1)	0.03	OrthoFinder output from all 47 species
MA_10429131g0010	AGO1	Protein argonaute 1B OS=Oryza sativa subsp. japonica...	0.08	OrthoFinder output from all 47 species
MA_159389g0010	AGO7, ZIP	Protein argonaute 7 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_18547g0010	AGO1	Protein argonaute 1A OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_594g0010	PNH, AGO10, ZLL	Protein argonaute PNH1 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_91896g0010	AGO1	Protein argonaute 1B OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Nbi_g43477	PNH, AGO10, ZLL	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g13807	AGO1	regulatory protein *(AGO7) of transacting siRNA pathway...	0.04	OrthoFinder output from all 47 species
Solyc02g069270.2.1	AGO2, Solyc02g069270	siRNA-binding factor (AGO2) of non-canonical RdDM pathway	0.06	OrthoFinder output from all 47 species
Solyc09g082830.4.1	PNH, AGO10, ZLL,...	RIS-Complex miRNA recruiting factor (AGO1)	0.03	OrthoFinder output from all 47 species
Zm00001e041452_P004	AGO1, Zm00001e041452	RIS-Complex miRNA recruiting factor (AGO1)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010050	vegetative phase change	IMP	Interproscan
BP	GO:0010267	ta-siRNA processing	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010599	lsiRNA processing	IMP	Interproscan
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016441	post-transcriptional gene silencing	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0030422	siRNA processing	None	Extended
BP	GO:0031047	RNA-mediated gene silencing	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0035194	RNA-mediated post-transcriptional gene silencing	None	Extended
BP	GO:0035195	miRNA-mediated gene silencing	TAS	Interproscan
BP	GO:0040034	regulation of development, heterochronic	IMP	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070918	regulatory ncRNA processing	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009845	seed germination	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032474	Argonaute_N	164	306
IPR003100	PAZ_dom	379	498
IPR014811	ArgoL1	316	365
IPR032472	ArgoL2	510	556
IPR003165	Piwi	650	948

External Links

No external refs found!

AT1G69440 (AGO7, ZIP)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation