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AT1G68940


Description : Armadillo/beta-catenin-like repeat family protein


Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G68940

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00256300 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Adi_g017421 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0111.g045660 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=666-3779 0.02 OrthoFinder output from all 47 species
Ceric.03G046500.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.14G057700.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g06205 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001115001 PUB8, B80 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01010123001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
GSVIVT01013395001 PUB44, SAUL1, ATPUB44 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
GSVIVT01024723001 PUB44, SAUL1, ATPUB44 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os06g16410.1 LOC_Os06g16410 E3 ubiquitin ligase (PUB) 0.07 OrthoFinder output from all 47 species
LOC_Os12g17880.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Lfl_g03394 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
MA_9861711g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019783 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=770-3868 0.02 OrthoFinder output from all 47 species
Solyc04g082570.3.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Spa_g18098 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 249 319
No external refs found!