AT1G67800

Description : Copine (Calcium-dependent phospholipid-binding protein) family

Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G67800

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00153710	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.06	OrthoFinder output from all 47 species
AMTR_s00166p00070360	RGLG2,...	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
Aop_g57714	RGLG1	E3 ubiquitin ligase *(RGLG) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g05132	No alias	E3 ubiquitin ligase *(RGLG) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g11748	No alias	E3 ubiquitin ligase *(RGLG) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14917	No alias	E3 ubiquitin ligase *(RGLG) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g26916	No alias	E3 ubiquitin ligase *(RGLG) & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020614.22	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	OrthoFinder output from all 47 species
Cre09.g399550	RGLG2	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
Cre09.g399915	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dde_g01458	RGLG1	E3 ubiquitin ligase *(RGLG) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g25180	RGLG2	E3 ubiquitin ligase *(RGLG) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g68060.1	RGLG2, LOC_Os01g68060	RING-HC-class E3 ligase. ligating E3 protein (RGLG)	0.03	OrthoFinder output from all 47 species
LOC_Os06g40650.1	RGLG2, LOC_Os06g40650	RING-HC-class E3 ligase. ligating E3 protein (RGLG)	0.02	OrthoFinder output from all 47 species
LOC_Os12g19030.1	RGLG2, LOC_Os12g19030	RING-HC-class E3 ligase. ligating E3 protein (RGLG)	0.03	OrthoFinder output from all 47 species
MA_10432712g0010	RGLG2	RING-HC-class E3 ligase. ligating E3 protein (RGLG)	0.05	OrthoFinder output from all 47 species
MA_462034g0010	No alias	E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp6g16390.1	RGLG2	RING-HC-class E3 ligase. ligating E3 protein (RGLG)	0.02	OrthoFinder output from all 47 species
Mp6g16430.1	RGLG2	RING-HC-class E3 ligase. ligating E3 protein (RGLG)	0.02	OrthoFinder output from all 47 species
Ppi_g07448	RGLG1	E3 ubiquitin ligase *(RGLG) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g19140	No alias	E3 ubiquitin ligase *(RGLG) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55605	No alias	E3 ubiquitin ligase *(RGLG) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g01763	RGLG2	E3 ubiquiTin ligase *(RGLG) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e028521_P002	RGLG2, Zm00001e028521	RING-HC-class E3 ligase. ligating E3 protein (RGLG)	0.05	OrthoFinder output from all 47 species
Zm00001e029296_P001	Zm00001e029296	RING-HC-class E3 ligase. ligating E3 protein (RGLG)	0.04	OrthoFinder output from all 47 species
Zm00001e030550_P001	RGLG2, Zm00001e030550	RING-HC-class E3 ligase. ligating E3 protein (RGLG)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006497	protein lipidation	None	Extended
BP	GO:0006498	N-terminal protein lipidation	None	Extended
BP	GO:0006499	N-terminal protein myristoylation	IDA	Interproscan
BP	GO:0006499	N-terminal protein myristoylation	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009696	salicylic acid metabolic process	None	Extended
BP	GO:0009697	salicylic acid biosynthetic process	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0018377	protein myristoylation	None	Extended
BP	GO:0018958	phenol-containing compound metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	RCA	Interproscan
BP	GO:0031365	N-terminal protein amino acid modification	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	RCA	Interproscan
BP	GO:0046189	phenol-containing compound biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0001653	peptide receptor activity	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004383	guanylate cyclase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004630	phospholipase D activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008154	actin polymerization or depolymerization	IEP	HCCA
BP	GO:0009553	embryo sac development	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
MF	GO:0009975	cyclase activity	IEP	HCCA
BP	GO:0010044	response to aluminum ion	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0030041	actin filament polymerization	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
CC	GO:0031965	nuclear membrane	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0051302	regulation of cell division	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010734	Copine_C	116	330

External Links

No external refs found!

AT1G67800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation