AT1G67310

Description : Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains

Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G67310

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00052450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.CAMTA...	0.04	OrthoFinder output from all 47 species
Aop_g07073	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g14066	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.12G055700.1	CAMTA3, SR1,...	CAMTA-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.24G013800.1	CAMTA3, SR1,...	CAMTA-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G019600.1	Ceric.31G019600	CAMTA-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
GSVIVT01004860001	CAMTA3, SR1	RNA biosynthesis.transcriptional activation.CAMTA...	0.05	OrthoFinder output from all 47 species
LOC_Os04g31900.1	LOC_Os04g31900	transcription factor (CAMTA)	0.05	OrthoFinder output from all 47 species
Mp7g03150.1	CAMTA3, SR1	transcription factor (CAMTA)	0.03	OrthoFinder output from all 47 species
Sam_g07183	No alias	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo440304	CAMTA3, SR1	Calmodulin-binding transcription activator 3...	0.03	OrthoFinder output from all 47 species
Solyc01g105230.4.1	Solyc01g105230	transcription factor (CAMTA)	0.03	OrthoFinder output from all 47 species
Solyc05g015650.3.1	Solyc05g015650	transcription factor (CAMTA)	0.05	OrthoFinder output from all 47 species
Solyc12g099340.3.1	Solyc12g099340	transcription factor (CAMTA)	0.03	OrthoFinder output from all 47 species
Tin_g21019	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e002794_P002	CAMTA3, SR1,...	transcription factor (CAMTA)	0.02	OrthoFinder output from all 47 species
Zm00001e008367_P002	Zm00001e008367	transcription factor (CAMTA)	0.04	OrthoFinder output from all 47 species
Zm00001e012888_P005	CAMTA3, SR1,...	transcription factor (CAMTA)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000578	embryonic axis specification	IEP	HCCA
BP	GO:0007059	chromosome segregation	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0007131	reciprocal meiotic recombination	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009638	phototropism	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009785	blue light signaling pathway	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009846	pollen germination	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009942	longitudinal axis specification	IEP	HCCA
BP	GO:0009945	radial axis specification	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0030522	intracellular receptor signaling pathway	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0035825	homologous recombination	IEP	HCCA
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048653	anther development	IEP	HCCA
BP	GO:0051259	protein complex oligomerization	IEP	HCCA
BP	GO:0051260	protein homooligomerization	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0061982	meiosis I cell cycle process	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0071214	cellular response to abiotic stimulus	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071483	cellular response to blue light	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098813	nuclear chromosome segregation	IEP	HCCA
BP	GO:0104004	cellular response to environmental stimulus	IEP	HCCA
BP	GO:0140527	reciprocal homologous recombination	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002909	IPT_dom	447	530
IPR000048	IQ_motif_EF-hand-BS	857	875
IPR000048	IQ_motif_EF-hand-BS	880	899
IPR005559	CG-1_dom	44	157
IPR020683	DUF3447	668	740

External Links

No external refs found!

AT1G67310

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation