AMTR_s00049p00109690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.85

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.delta subunit


Gene families : OG_01_0002568 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002568_tree ,
OG_02_0003021 (LandPlants) Phylogenetic Tree(s): OG_02_0003021_tree ,
OG_03_0004105 (SeedPlants) Phylogenetic Tree(s): OG_03_0004105_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00109690
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
MA_20701g0020 No alias Coatomer subunit delta-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Pp3c20_16550V3.1 No alias clathrin adaptor complexes medium subunit family protein 0.02 Archaeplastida
Pp3c8_9870V3.1 No alias clathrin adaptor complexes medium subunit family protein 0.06 Archaeplastida
Solyc01g103480.3.1 No alias subunit delta of cargo adaptor F-subcomplex 0.02 Archaeplastida
Zm00001e018368_P003 No alias subunit delta of cargo adaptor F-subcomplex 0.02 Archaeplastida
LOC_Os05g24601.1 No alias subunit delta of cargo adaptor F-subcomplex 0.02 LandPlants
Pp3c20_16550V3.1 No alias clathrin adaptor complexes medium subunit family protein 0.02 LandPlants
Pp3c8_9870V3.1 No alias clathrin adaptor complexes medium subunit family protein 0.05 LandPlants
Solyc01g103480.3.1 No alias subunit delta of cargo adaptor F-subcomplex 0.02 LandPlants
Zm00001e018368_P003 No alias subunit delta of cargo adaptor F-subcomplex 0.02 LandPlants
AT5G05010 No alias clathrin adaptor complexes medium subunit family protein 0.02 SeedPlants
LOC_Os05g24601.1 No alias subunit delta of cargo adaptor F-subcomplex 0.02 SeedPlants
Solyc01g103480.3.1 No alias subunit delta of cargo adaptor F-subcomplex 0.02 SeedPlants
Zm00001e018368_P003 No alias subunit delta of cargo adaptor F-subcomplex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030131 clathrin adaptor complex IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!