AT1G66410 (ACAM-4, CAM4)

Aliases : ACAM-4, CAM4

Description : calmodulin 4

Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G66410
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
Ala_g05659	ACAM-6, CAM6	calcium sensor *(CML) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g36845	CAM3, acam-3	calcium sensor *(CML) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0257.g060582	CAM3, acam-3	calcium sensor *(CML) & original description: CDS=211-660	0.04	OrthoFinder output from all 47 species
Cba_g08304	ACAM-6, CAM6	calcium sensor *(CML) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g35000	CAM3, acam-3	calcium sensor *(CML) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.20G013100.1	CAM3, acam-3,...	calcium sensor *(CML) & original description:...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000113.121	ACAM-6, CAM6	Calmodulin OS=Chlamydomonas reinhardtii	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000692.65	ACAM-6, CAM6	Calmodulin-2 OS=Oryza sativa subsp. japonica	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000789.35	No alias	Calmodulin-like protein 1 OS=Oryza sativa subsp. japonica	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001164.22	CPK7	Dynein 18 kDa light chain, flagellar outer arm...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021070.12	No alias	Calmodulin OS=Chlamydomonas reinhardtii	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021435.44	ACAM-6, CAM6	Calmodulin OS=Mougeotia scalaris	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021435.47	ACAM-6, CAM6	Calmodulin OS=Mougeotia scalaris	0.03	OrthoFinder output from all 47 species
Cre03.g150300	ACAM-6, CAM6	Calmodulin-3 OS=Oryza sativa subsp. japonica	0.02	OrthoFinder output from all 47 species
LOC_Os01g17190.1	ACAM-6, CAM6,...	Calmodulin-related protein OS=Petunia hybrida...	0.05	OrthoFinder output from all 47 species
LOC_Os05g41210.1	ACAM-6, CAM6,...	Calmodulin-related protein OS=Petunia hybrida...	0.09	OrthoFinder output from all 47 species
Lfl_g28621	CAM3, acam-3	calcium sensor *(CML) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g10911	CAM3, acam-3	calcium sensor *(CML) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14970	CAM3, acam-3	calcium sensor *(CML) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g39673	CAM3, acam-3	calcium sensor *(CML) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g098050.3.1	CAM3, acam-3,...	Calmodulin OS=Solanum lycopersicum (sp\|p27161\|calm_sollc : 234.0)	0.02	OrthoFinder output from all 47 species
Spa_g02829	TCH1, CAM1, ACAM-1	calcium sensor *(CML) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g54996	CAM3, acam-3	calcium sensor *(CML) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g26354	CAM3, acam-3	calcium sensor *(CML) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e031996_P001	ATCAL5, CAM2,...	Calmodulin-related protein OS=Petunia hybrida...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004871	obsolete signal transducer activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISS	Interproscan
MF	GO:0005509	calcium ion binding	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009612	response to mechanical stimulus	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0019722	calcium-mediated signaling	RCA	Interproscan
BP	GO:0019932	second-messenger-mediated signaling	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030048	actin filament-based movement	RCA	Interproscan
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051645	Golgi localization	RCA	Interproscan
BP	GO:0051646	mitochondrion localization	RCA	Interproscan
BP	GO:0060151	peroxisome localization	RCA	Interproscan
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0004750	D-ribulose-phosphate 3-epimerase activity	IEP	HCCA
BP	GO:0005513	detection of calcium ion	IEP	HCCA
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	HCCA
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	HCCA
CC	GO:0005753	mitochondrial proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0005768	endosome	IEP	HCCA
CC	GO:0005770	late endosome	IEP	HCCA
CC	GO:0005771	multivesicular body	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
CC	GO:0005885	Arp2/3 protein complex	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0007276	gamete generation	IEP	HCCA
BP	GO:0007292	female gamete generation	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
BP	GO:0008154	actin polymerization or depolymerization	IEP	HCCA
MF	GO:0008320	protein transmembrane transporter activity	IEP	HCCA
CC	GO:0008540	proteasome regulatory particle, base subcomplex	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
CC	GO:0009504	cell plate	IEP	HCCA
BP	GO:0009593	detection of chemical stimulus	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009853	photorespiration	IEP	HCCA
BP	GO:0010015	root morphogenesis	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010078	maintenance of root meristem identity	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	HCCA
BP	GO:0030036	actin cytoskeleton organization	IEP	HCCA
BP	GO:0030041	actin filament polymerization	IEP	HCCA
CC	GO:0030964	NADH dehydrogenase complex	IEP	HCCA
CC	GO:0031410	cytoplasmic vesicle	IEP	HCCA
CC	GO:0031982	vesicle	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0035266	meristem growth	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
BP	GO:0043094	cellular metabolic compound salvage	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
CC	GO:0045259	proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0045271	respiratory chain complex I	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0048232	male gamete generation	IEP	HCCA
BP	GO:0048829	root cap development	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0051592	response to calcium ion	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
BP	GO:0060968	obsolete regulation of gene silencing	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
BP	GO:0090351	seedling development	IEP	HCCA
CC	GO:0097708	intracellular vesicle	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
MF	GO:0140318	protein transporter activity	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	83	146
IPR002048	EF_hand_dom	12	73

External Links

No external refs found!

AT1G66410 (ACAM-4, CAM4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation