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  5. AT1G64540

AT1G64540


Description : F-box/FBD-like domains containing protein


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G64540

Target Alias Description ECC score Gene Family Method Actions
AT1G47920 No alias RNI-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT1G52650 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G29930 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G44060 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G44080 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT3G44090 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G58860 No alias F-box/RNI-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT3G58880 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G58920 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G59190 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G59230 No alias RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G59240 No alias RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G62440 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G15620 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G25860 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from all 47 species
AT5G38396 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G41630 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0004034 aldose 1-epimerase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0010089 xylem development IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 145 169
IPR001810 F-box_dom 7 41
No external refs found!