AT1G64090 (RTNLB3)

Aliases : RTNLB3

Description : Reticulan like protein B3

Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G64090

Target	Alias	Description	ECC score	Gene Family Method
Als_g32950	No alias	ER-tubule curvature-inducing protein *(Reticulon) &...	0.03	OrthoFinder output from all 47 species
Als_g60937	No alias	ER-tubule curvature-inducing protein *(Reticulon) &...	0.03	OrthoFinder output from all 47 species
Aop_g13484	No alias	ER-tubule curvature-inducing protein *(Reticulon) &...	0.03	OrthoFinder output from all 47 species
Aop_g69441	No alias	ER-tubule curvature-inducing protein *(Reticulon) &...	0.01	OrthoFinder output from all 47 species
Ceric.19G012300.1	Ceric.19G012300	ER-tubule curvature-inducing protein *(Reticulon) &...	0.02	OrthoFinder output from all 47 species
Smo113819	RTNLB2, BTI2	Reticulon-like protein B16 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Zm00001e026095_P001	RTNLB2, BTI2,...	ER-associated protein (Reticulon)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005783	endoplasmic reticulum	ISS	Interproscan
CC	GO:0005789	endoplasmic reticulum membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007029	endoplasmic reticulum organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
CC	GO:0071458	obsolete integral component of cytoplasmic side of endoplasmic reticulum membrane	IDA	Interproscan
CC	GO:0071782	endoplasmic reticulum tubular network	IDA	Interproscan
BP	GO:0071786	endoplasmic reticulum tubular network organization	IMP	Interproscan
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098827	endoplasmic reticulum subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005640	nuclear outer membrane	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0031965	nuclear membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003388	Reticulon	65	219

External Links

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