AT1G64040 (TOPP3)

Aliases : TOPP3

Description : type one serine/threonine protein phosphatase 3

Gene families : OG0000848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000848_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G64040

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00134520	TOPP4,...	Protein modification.dephosphorylation.serine/threonine...	0.04	OrthoFinder output from all 47 species
AMTR_s00165p00079470	TOPP4,...	Protein modification.dephosphorylation.serine/threonine...	0.05	OrthoFinder output from all 47 species
Adi_g022933	TOPP4	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ala_g18717	TOPP4	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Aob_g10735	TOPP4	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aop_g11209	TOPP4	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Aop_g21389	TOPP4	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0002.g001362	TOPP4	EC_3.1 hydrolase acting on ester bond & original...	0.04	OrthoFinder output from all 47 species
Cre06.g292550	TOPP4	Protein modification.dephosphorylation.serine/threonine...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005512	TOPP2, PPO	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Solyc05g055060.3.1	TOPP4, Solyc05g055060	PP1 phosphatase	0.03	OrthoFinder output from all 47 species
Spa_g08843	TOPP4	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Spa_g24931	TOPP4	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Spa_g50539	TOPP4	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000164	protein phosphatase type 1 complex	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004721	phosphoprotein phosphatase activity	None	Extended
MF	GO:0004722	protein serine/threonine phosphatase activity	IDA	Interproscan
MF	GO:0004722	protein serine/threonine phosphatase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0006470	protein dephosphorylation	RCA	Interproscan
BP	GO:0006470	protein dephosphorylation	TAS	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0008287	protein serine/threonine phosphatase complex	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016311	dephosphorylation	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1903293	phosphatase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004105	choline-phosphate cytidylyltransferase activity	IEP	HCCA
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	HCCA
BP	GO:0005982	starch metabolic process	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006656	phosphatidylcholine biosynthetic process	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009853	photorespiration	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0019252	starch biosynthetic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
CC	GO:0030964	NADH dehydrogenase complex	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
BP	GO:0043094	cellular metabolic compound salvage	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
CC	GO:0045271	respiratory chain complex I	IEP	HCCA
BP	GO:0046470	phosphatidylcholine metabolic process	IEP	HCCA
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
MF	GO:0070567	cytidylyltransferase activity	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR031675	STPPase_N	6	53
IPR004843	Calcineurin-like_PHP_ApaH	55	246

External Links

No external refs found!

AT1G64040 (TOPP3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation