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AT1G63230


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G63230
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00241130 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g14770,... 0.03 OrthoFinder output from all 47 species
AT1G63630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Dcu_g19215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430317g0040 No alias Pentatricopeptide repeat-containing protein At4g11690... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 5 37
IPR002885 Pentatricopeptide_repeat 44 68
IPR002885 Pentatricopeptide_repeat 76 123
IPR002885 Pentatricopeptide_repeat 179 228
IPR002885 Pentatricopeptide_repeat 250 298
IPR002885 Pentatricopeptide_repeat 147 177
No external refs found!