AT1G62250

Description : unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Gene families : OG0007654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007654_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G62250

Target	Alias	Description	ECC score	Gene Family Method
Ala_g28480	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g20675	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene06157.t1	Aspi01Gene06157	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0004.g008705	No alias	not classified & original description: CDS=586-1212	0.04	OrthoFinder output from all 47 species
Ceric.07G099200.1	Ceric.07G099200	not classified & original description: pacid=50627301...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00022080.4	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dcu_g20600	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01012704001	No alias	No description available	0.09	OrthoFinder output from all 47 species
LOC_Os03g53300.2	LOC_Os03g53300	no hits & (original description: none)	0.12	OrthoFinder output from all 47 species
Lfl_g04507	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Mp5g15200.1	No alias	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Nbi_g24785	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g03260	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15184	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g080780.3.1	Solyc02g080780	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
Spa_g51672	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12658	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005645_P001	Zm00001e005645	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006787	porphyrin-containing compound catabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015994	chlorophyll metabolic process	None	Extended
BP	GO:0015996	chlorophyll catabolic process	RCA	Interproscan
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033015	tetrapyrrole catabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046149	pigment catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006743	ubiquinone metabolic process	IEP	HCCA
BP	GO:0006744	ubiquinone biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010218	response to far red light	IEP	HCCA
BP	GO:0010264	myo-inositol hexakisphosphate biosynthetic process	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
BP	GO:0016556	mRNA modification	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
CC	GO:0030076	light-harvesting complex	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	HCCA
BP	GO:0033517	myo-inositol hexakisphosphate metabolic process	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0042180	cellular ketone metabolic process	IEP	HCCA
BP	GO:0042181	ketone biosynthetic process	IEP	HCCA
BP	GO:0043647	inositol phosphate metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1901661	quinone metabolic process	IEP	HCCA
BP	GO:1901663	quinone biosynthetic process	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G62250

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation