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AT1G61540


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0005233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G61540
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT1G60570 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G45406 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G43710 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G19330 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G29370 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33900 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.03 OrthoFinder output from all 47 species
AT5G02980 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G51250 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 180 218
IPR006652 Kelch_1 127 176
IPR001810 F-box_dom 26 69
No external refs found!