AT1G59940 (ARR3)

Aliases : ARR3

Description : response regulator 3

Gene families : OG0000389 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000389_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G59940
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00063p00116400	ATRR3, ARR8,...	Phytohormones.cytokinin.perception and signal...	0.04	OrthoFinder output from all 47 species
AMTR_s00099p00091470	ATRR4, ARR9,...	Phytohormones.cytokinin.perception and signal...	0.03	OrthoFinder output from all 47 species
Aev_g27785	ARR3	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
Als_g10129	ATRR4, ARR9	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
Als_g18174	ARR3	A-type ARR response regulator of cytokinin signalling &...	0.02	OrthoFinder output from all 47 species
Als_g22665	MEE7, ARR4, ATRR1, IBC7	A-type ARR response regulator of cytokinin signalling &...	0.02	OrthoFinder output from all 47 species
Als_g31766	ARR7	A-type ARR response regulator of cytokinin signalling &...	0.02	OrthoFinder output from all 47 species
Als_g62964	MEE7, ARR4, ATRR1, IBC7	A-type ARR response regulator of cytokinin signalling &...	0.02	OrthoFinder output from all 47 species
Aop_g08056	ATRR4, ARR9	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene29100.t1	MEE7, ARR4,...	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene29763.t1	ATRR4, ARR9,...	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene58345.t1	MEE7, ARR4,...	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene70468.t1	ARR15, Aspi01Gene70468	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
Ceric.17G073000.1	MEE7, ARR4,...	A-type ARR response regulator of cytokinin signalling &...	0.04	OrthoFinder output from all 47 species
Ceric.20G049700.1	ARR3, Ceric.20G049700	A-type ARR response regulator of cytokinin signalling &...	0.04	OrthoFinder output from all 47 species
Dde_g17471	ATRR4, ARR9	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
GSVIVT01008850001	ATRR4, ARR9	Phytohormones.cytokinin.perception and signal...	0.03	OrthoFinder output from all 47 species
GSVIVT01033610001	ATRR4, ARR9	Phytohormones.cytokinin.perception and signal...	0.03	OrthoFinder output from all 47 species
LOC_Os08g26990.1	ARR3, LOC_Os08g26990	A-type cytokinin ARR response negative regulator	0.03	OrthoFinder output from all 47 species
LOC_Os08g28900.1	ARR3, LOC_Os08g28900	A-type cytokinin ARR response negative regulator	0.05	OrthoFinder output from all 47 species
LOC_Os08g28950.1	ARR3, LOC_Os08g28950	A-type cytokinin ARR response negative regulator	0.03	OrthoFinder output from all 47 species
MA_111961g0010	ARR7	A-type cytokinin ARR response negative regulator	0.03	OrthoFinder output from all 47 species
MA_132682g0010	ARR3	A-type cytokinin ARR response negative regulator	0.02	OrthoFinder output from all 47 species
MA_23430g0010	ARR15	A-type cytokinin ARR response negative regulator	0.03	OrthoFinder output from all 47 species
MA_7289g0010	MEE7, ARR4, ATRR1, IBC7	A-type cytokinin ARR response negative regulator	0.04	OrthoFinder output from all 47 species
MA_89669g0010	ARR3	A-type cytokinin ARR response negative regulator	0.03	OrthoFinder output from all 47 species
Mp3g03810.1	ARR16, RR16	A-type cytokinin ARR response negative regulator	0.02	OrthoFinder output from all 47 species
Msp_g10929	MEE7, ARR4, ATRR1, IBC7	A-type ARR response regulator of cytokinin signalling &...	0.02	OrthoFinder output from all 47 species
Msp_g22749	ARR3	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
Nbi_g05681	MEE7, ARR4, ATRR1, IBC7	A-type ARR response regulator of cytokinin signalling &...	0.02	OrthoFinder output from all 47 species
Nbi_g39758	ATRR3, ARR8, RR3	A-type ARR response regulator of cytokinin signalling &...	0.02	OrthoFinder output from all 47 species
Pir_g37230	MEE7, ARR4, ATRR1, IBC7	A-type ARR response regulator of cytokinin signalling &...	0.07	OrthoFinder output from all 47 species
Ppi_g06350	ARR7	A-type ARR response regulator of cytokinin signalling &...	0.03	OrthoFinder output from all 47 species
Solyc02g071220.3.1	ATRR4, ARR9,...	A-type cytokinin ARR response negative regulator	0.04	OrthoFinder output from all 47 species
Solyc10g079700.2.1	ATRR4, ARR9,...	A-type cytokinin ARR response negative regulator	0.03	OrthoFinder output from all 47 species
Zm00001e004298_P001	ARR3, Zm00001e004298	A-type cytokinin ARR response negative regulator	0.02	OrthoFinder output from all 47 species
Zm00001e018596_P002	ATRR3, ARR8,...	A-type cytokinin ARR response negative regulator	0.06	OrthoFinder output from all 47 species
Zm00001e022300_P001	ARR3, Zm00001e022300	A-type cytokinin ARR response negative regulator	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IDA	Interproscan
MF	GO:0000156	phosphorelay response regulator activity	ISS	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IDA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	TAS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007623	circadian rhythm	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IEP	Interproscan
BP	GO:0009736	cytokinin-activated signaling pathway	TAS	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010114	response to red light	IMP	Interproscan
BP	GO:0010161	red light signaling pathway	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042752	regulation of circadian rhythm	IGI	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0071491	cellular response to red light	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
BP	GO:0009739	response to gibberellin	IEP	HCCA
BP	GO:0010029	regulation of seed germination	IEP	HCCA
BP	GO:0010030	positive regulation of seed germination	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010359	regulation of anion channel activity	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0032409	regulation of transporter activity	IEP	HCCA
BP	GO:0032412	regulation of monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0044070	regulation of monoatomic anion transport	IEP	HCCA
BP	GO:0046685	response to arsenic-containing substance	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:1900140	regulation of seedling development	IEP	HCCA
BP	GO:1903959	regulation of monoatomic anion transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	35	153

External Links

No external refs found!

AT1G59940 (ARR3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation