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Gb_38220


Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana (sp|q8w4b1|rcf3_arath : 435.0)


Gene families : OG_01_0000393 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000393_tree ,
OG_02_0000380 (LandPlants) Phylogenetic Tree(s): OG_02_0000380_tree ,
OG_03_0005882 (SeedPlants) Phylogenetic Tree(s): OG_03_0005882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38220
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00221750 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
AT5G64390 HEN4 RNA-binding KH domain-containing protein 0.03 Archaeplastida
GSVIVT01038571001 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
LOC_Os09g32300.1 No alias KH domain-containing protein HEN4 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os10g35220.1 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 Archaeplastida
MA_10429211g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.03 Archaeplastida
MA_6622g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 Archaeplastida
MA_71572g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g034200.3.1 No alias RNA-binding KH domain-containing protein RCF3... 0.04 Archaeplastida
Solyc04g077060.3.1 No alias RNA-binding KH domain-containing protein RCF3... 0.03 Archaeplastida
Solyc05g007810.3.1 No alias RNA-binding KH domain-containing protein RCF3... 0.04 Archaeplastida
Solyc08g048500.3.1 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e037033_P001 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
Zm00001e039986_P003 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 Archaeplastida
AMTR_s00033p00116200 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 LandPlants
AMTR_s00033p00221750 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants
AT5G64390 HEN4 RNA-binding KH domain-containing protein 0.03 LandPlants
GSVIVT01038571001 No alias RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants
LOC_Os01g13470.1 No alias RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants
LOC_Os06g23460.1 No alias RNA-binding KH domain-containing protein RCF3... 0.01 LandPlants
LOC_Os09g32300.1 No alias KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 LandPlants
MA_10429211g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants
MA_6622g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 LandPlants
Solyc05g007810.3.1 No alias RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants
Zm00001e037033_P001 No alias RNA-binding KH domain-containing protein RCF3... 0.01 LandPlants
GSVIVT01038571001 No alias RNA-binding KH domain-containing protein RCF3... 0.02 SeedPlants
LOC_Os06g23460.1 No alias RNA-binding KH domain-containing protein RCF3... 0.01 SeedPlants
MA_10429211g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.02 SeedPlants
Zm00001e037033_P001 No alias RNA-binding KH domain-containing protein RCF3... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 343 392
IPR004088 KH_dom_type_1 177 246
IPR004088 KH_dom_type_1 66 113
IPR004088 KH_dom_type_1 603 665
IPR004088 KH_dom_type_1 426 490
No external refs found!