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AT1G59124


Description : Disease resistance protein (CC-NBS-LRR class) family


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G59124
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00196010 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00145930 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00165330 RPM1, RPS3,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00205330 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00057720 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00090p00091780 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00190p00029950 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00202p00037220 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.08 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.05 OrthoFinder output from all 47 species
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
Aob_g31795 RPP13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g60132 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.29 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
GSVIVT01012165001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01018564001 No alias Putative disease resistance RPP13-like protein 3... 0.03 OrthoFinder output from all 47 species
GSVIVT01024101001 RPP13 Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01026725001 No alias Putative disease resistance protein At1g50180... 0.07 OrthoFinder output from all 47 species
GSVIVT01026728001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01026742001 No alias Putative disease resistance protein At1g50180... 0.08 OrthoFinder output from all 47 species
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.06 OrthoFinder output from all 47 species
GSVIVT01026747001 No alias Putative disease resistance protein At1g50180... 0.04 OrthoFinder output from all 47 species
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Gb_35026 ZAR1 Disease resistance protein RPP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g41890.1 LOC_Os01g41890 no description available(sp|f7j0n2|rga5r_orysj : 246.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g46550.1 RPP13, LOC_Os03g46550 no description available(sp|q2r8l1|rga5s_orysj : 340.0) 0.03 OrthoFinder output from all 47 species
LOC_Os06g22460.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28470.1 LOC_Os08g28470 no description available(sp|q2qzf1|pik6_orysj : 108.0) 0.03 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g11990.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g12330.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g13440.1 LOC_Os11g13440 no description available(sp|q2r8l1|rga5s_orysj : 304.0) 0.03 OrthoFinder output from all 47 species
LOC_Os12g17430.1 LOC_Os12g17430 no description available(sp|p0do08|pikm2_orysj : 108.0) 0.07 OrthoFinder output from all 47 species
Pir_g31525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g084890.3.1 ZAR1, Solyc02g084890 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g005650.1.1 Solyc03g005650 Probable disease resistance protein At1g58390... 0.03 OrthoFinder output from all 47 species
Solyc03g005670.3.1 Solyc03g005670 Disease resistance RPP8-like protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g009110.1.1 RPP13, Solyc04g009110 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc07g053020.3.1 ZAR1, Solyc07g053020 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e024479_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0006952 defense response ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0030863 cortical cytoskeleton IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 167 419
No external refs found!