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  5. AT1G58320

AT1G58320


Description : PLAC8 family protein


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G58320

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00033430 evm_27.TU.AmTr_v1... Cell number regulator 10 OS=Zea mays 0.07 OrthoFinder output from all 47 species
AT1G49030 No alias PLAC8 family protein 0.04 OrthoFinder output from all 47 species
AT1G52200 No alias PLAC8 family protein 0.05 OrthoFinder output from all 47 species
AT3G18450 No alias PLAC8 family protein 0.04 OrthoFinder output from all 47 species
AT3G18460 No alias PLAC8 family protein 0.04 OrthoFinder output from all 47 species
AT5G35525 No alias PLAC8 family protein 0.04 OrthoFinder output from all 47 species
Aob_g28747 PCR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13588.t1 Aspi01Gene13588 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15484.t1 Aspi01Gene15484 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57109.t1 Aspi01Gene57109 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G000300.1 Ceric.19G000300 not classified & original description: pacid=50576139... 0.02 OrthoFinder output from all 47 species
Dac_g03081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011687001 PCR2 Cell number regulator 2 OS=Zea mays 0.03 OrthoFinder output from all 47 species
GSVIVT01011689001 PCR2 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01011693001 PCR2 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01011694001 No alias Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01011927001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01018665001 No alias Cell number regulator 6 OS=Zea mays 0.03 OrthoFinder output from all 47 species
Gb_14595 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os03g61470.1 LOC_Os03g61470 Cell number regulator 10 OS=Zea mays... 0.07 OrthoFinder output from all 47 species
LOC_Os03g61500.1 PCR2, LOC_Os03g61500 Cell number regulator 10 OS=Zea mays... 0.06 OrthoFinder output from all 47 species
LOC_Os10g02300.3 LOC_Os10g02300 Cell number regulator 10 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
MA_23074g0010 No alias Cell number regulator 1 OS=Zea mays... 0.07 OrthoFinder output from all 47 species
MA_452689g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g10640.1 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g01890.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g35007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo439474 No alias Cell number regulator 4 OS=Zea mays 0.02 OrthoFinder output from all 47 species
Solyc03g119660.2.1 Solyc03g119660 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc05g009620.4.1 Solyc05g009620 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g066590.4.1 Solyc06g066590 Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc08g013920.3.1 Solyc08g013920 Cell number regulator 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Solyc12g037950.2.1 Solyc12g037950 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e006266_P001 PCR11, Zm00001e006266 Cell number regulator 7 OS=Zea mays... 0.07 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e023819_P001 Zm00001e023819 Cell number regulator 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 17 115
No external refs found!