AT1G57770

Description : FAD/NAD(P)-binding oxidoreductase family protein

Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G57770

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00187330	evm_27.TU.AmTr_v1...	Prolycopene isomerase, chloroplastic OS=Daucus carota	0.03	OrthoFinder output from all 47 species
Aev_g49491	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g06469	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g05632	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g07926	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g27219	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.32G057300.1	Ceric.32G057300	not classified & original description: pacid=50597506...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001258.10	No alias	No description available	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020723.8	No alias	No description available	0.04	OrthoFinder output from all 47 species
Cre09.g407200	No alias	Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum	0.03	OrthoFinder output from all 47 species
Cre16.g674950	No alias	Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum	0.06	OrthoFinder output from all 47 species
Dac_g23383	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g10069	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g14193	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01023233001	No alias	Prolycopene isomerase, chloroplastic OS=Daucus carota	0.07	OrthoFinder output from all 47 species
Gb_39488	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
LOC_Os03g62510.1	LOC_Os03g62510	Prolycopene isomerase, chloroplastic OS=Daucus carota...	0.03	OrthoFinder output from all 47 species
MA_10428660g0010	No alias	Prolycopene isomerase 1, chloroplastic OS=Oncidium...	0.02	OrthoFinder output from all 47 species
Ppi_g10834	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g62907	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014061	No alias	not classified & original description: CDS=115-1746	0.03	OrthoFinder output from all 47 species
Spa_g07332	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g12165	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g23774	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e011669_P002	Zm00001e011669	Prolycopene isomerase, chloroplastic OS=Daucus carota...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016108	tetraterpenoid metabolic process	None	Extended
BP	GO:0016109	tetraterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016116	carotenoid metabolic process	None	Extended
BP	GO:0016117	carotenoid biosynthetic process	IBA	Interproscan
MF	GO:0016491	oxidoreductase activity	ISS	Interproscan
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
MF	GO:0046608	carotenoid isomerase activity	IBA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009535	chloroplast thylakoid membrane	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0009668	plastid membrane organization	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010027	thylakoid membrane organization	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010205	photoinhibition	IEP	HCCA
CC	GO:0010287	plastoglobule	IEP	HCCA
BP	GO:0010304	PSII associated light-harvesting complex II catabolic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019757	glycosinolate metabolic process	IEP	HCCA
BP	GO:0019758	glycosinolate biosynthetic process	IEP	HCCA
BP	GO:0019760	glucosinolate metabolic process	IEP	HCCA
BP	GO:0019761	glucosinolate biosynthetic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
CC	GO:0042170	plastid membrane	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0043155	negative regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
CC	GO:0055035	plastid thylakoid membrane	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
BP	GO:1905156	negative regulation of photosynthesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002937	Amino_oxidase	62	557

External Links

No external refs found!

AT1G57770

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation