1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G56440

AT1G56440 (TPR5)


Aliases : TPR5

Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0003637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003637_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G56440

Target Alias Description ECC score Gene Family Method Actions
Als_g02491 TPR5 polymerase-II assembly factor *(RPAP3) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.44 Hop2 No description available 0.01 OrthoFinder output from all 47 species
Dcu_g48721 TPR5 polymerase-II assembly factor *(RPAP3) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os05g03910.1 TPR5, LOC_Os05g03910 RPAP3 polymerase-II assembly factor 0.05 OrthoFinder output from all 47 species
Len_g03826 TPR5 polymerase-II assembly factor *(RPAP3) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
InterPro domains Description Start Stop
IPR025986 RPAP3-like_C 353 441
IPR019734 TPR_repeat 119 147
No external refs found!