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  5. AT1G56340

AT1G56340 (AtCRT1a, CRT1a, CRT1)


Aliases : AtCRT1a, CRT1a, CRT1

Description : calreticulin 1a


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G56340

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00024290 AtCRT1a, CRT1a,... Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Adi_g007818 CRT1b, AtCRT1b ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011348 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.05 OrthoFinder output from all 47 species
Adi_g054253 AtCRT3, EBS2, CRT3, PSL1 ER luminal lectin chaperone *(CRT) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g057356 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057357 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079758 CRT1b, AtCRT1b not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106042 CRT1b, AtCRT1b ER luminal lectin chaperone *(CRT) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g26121 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09257 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10127 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G021500.1 AtCRT1a, CRT1a,... ER luminal lectin chaperone *(CRT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.14G039100.1 AtCRT1a, CRT1a,... ER luminal lectin chaperone *(CRT) & original... 0.03 OrthoFinder output from all 47 species
Cre01.g038400 AtCRT1a, CRT1a, CRT1 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Dcu_g18966 PIP5K9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dcu_g22860 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06184 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028114001 AtCRT1a, CRT1a, CRT1 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Gb_07615 AtCRT1a, CRT1a, CRT1 lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
Gb_34343 AtCRT1a, CRT1a, CRT1 lectin chaperone (CRT) 0.04 OrthoFinder output from all 47 species
LOC_Os07g14270.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.08 OrthoFinder output from all 47 species
Msp_g10816 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g11081 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18394 AtCRT3, EBS2, CRT3, PSL1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31110 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32686 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39878 No alias ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo144212 CRT1b, AtCRT1b Protein modification.protein folding and quality... 0.05 OrthoFinder output from all 47 species
Solyc01g100380.4.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.08 OrthoFinder output from all 47 species
Spa_g18341 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.04 OrthoFinder output from all 47 species
Tin_g14035 AtCRT1a, CRT1a, CRT1 ER luminal lecTin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033207_P002 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0006457 protein folding RCA Interproscan
BP GO:0006979 response to oxidative stress IDA Interproscan
BP GO:0009408 response to heat RCA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009627 systemic acquired resistance RCA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0034976 response to endoplasmic reticulum stress RCA Interproscan
BP GO:0042542 response to hydrogen peroxide RCA Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
CC GO:0048046 apoplast IDA Interproscan
BP GO:0055074 calcium ion homeostasis IGI Interproscan
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Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
CC GO:0000327 lytic vacuole within protein storage vacuole IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004306 ethanolamine-phosphate cytidylyltransferase activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006646 phosphatidylethanolamine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007276 gamete generation IEP HCCA
BP GO:0007292 female gamete generation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009934 regulation of meristem structural organization IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010078 maintenance of root meristem identity IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030611 arsenate reductase activity IEP HCCA
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP HCCA
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP HCCA
CC GO:0031307 obsolete integral component of mitochondrial outer membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046337 phosphatidylethanolamine metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0047484 regulation of response to osmotic stress IEP HCCA
BP GO:0048232 male gamete generation IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 26 261
IPR001580 Calret/calnex 263 336
No external refs found!