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AT1G56320


Description : BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0007343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G56320

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00063220 evm_27.TU.AmTr_v1... No description available 0.13 OrthoFinder output from all 47 species
AMTR_s00077p00135340 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
Ceric.36G001200.1 Ceric.36G001200 not classified & original description: pacid=50569108... 0.04 OrthoFinder output from all 47 species
GSVIVT01035038001 No alias No description available 0.18 OrthoFinder output from all 47 species
LOC_Os05g28780.1 LOC_Os05g28780 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
MA_60651g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_6755353g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_8271105g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g11360.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g24816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g060260.4.1 Solyc01g060260 no hits & (original description: none) 0.21 OrthoFinder output from all 47 species
Zm00001e001411_P001 Zm00001e001411 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Zm00001e031469_P001 Zm00001e031469 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0031225 obsolete anchored component of membrane TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:1903338 regulation of cell wall organization or biogenesis IEP HCCA
BP GO:2000652 regulation of secondary cell wall biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!