1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G55930

AT1G55930


Description : CBS domain-containing protein / transporter associated domain-containing protein


Gene families : OG0003877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003877_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55930
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Ceric.18G030900.1 Ceric.18G030900 magnesium cation transporter *(MGR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.21G009600.1 Ceric.21G009600 magnesium cation transporter *(MGR) & original... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
CC GO:0009536 plastid IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009662 etioplast organization IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010020 chloroplast fission IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019252 starch biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0031312 extrinsic component of organelle membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
CC GO:0035452 extrinsic component of plastid membrane IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043572 plastid fission IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046608 carotenoid isomerase activity IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1900865 chloroplast RNA modification IEP HCCA
BP GO:1900871 chloroplast mRNA modification IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002550 CNNM 158 335
IPR005170 Transptr-assoc_dom 495 599
IPR000644 CBS_dom 421 473
IPR000644 CBS_dom 350 408
No external refs found!