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  5. AT1G55800

AT1G55800


Description : Domain of unknown function (DUF2431)


Gene families : OG0001752 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001752_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55800
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Aev_g34638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g42733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012535001 No alias Uncharacterized protein At4g26485 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01014811001 No alias Heavy metal-associated isoprenylated plant protein 41... 0.03 OrthoFinder output from all 47 species
GSVIVT01014830001 No alias Uncharacterized protein At4g26485 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
MA_68061g0010 No alias Heavy metal-associated isoprenylated plant protein 41... 0.02 OrthoFinder output from all 47 species
MA_95371g0010 No alias Heavy metal-associated isoprenylated plant protein 41... 0.02 OrthoFinder output from all 47 species
Solyc07g065920.4.1 Solyc07g065920 Heavy metal-associated isoprenylated plant protein 41... 0.02 OrthoFinder output from all 47 species
Spa_g05708 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e034473_P001 Zm00001e034473 Heavy metal-associated isoprenylated plant protein 41... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
CC GO:0008278 cohesin complex IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0010032 meiotic chromosome condensation IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0047268 galactinol-raffinose galactosyltransferase activity IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0051177 meiotic sister chromatid cohesion IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation IEP HCCA
BP GO:0051455 monopolar spindle attachment to meiosis I kinetochore IEP HCCA
BP GO:0051754 meiotic sister chromatid cohesion, centromeric IEP HCCA
BP GO:0070601 centromeric sister chromatid cohesion IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019446 BMT5-like 29 180
No external refs found!