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AT1G55535


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).


Gene families : OG0003752 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003752_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55535

Target Alias Description ECC score Gene Family Method Actions
Adi_g018233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033129_P001 Zm00001e033129 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!