AT1G54940 (PGSIP4)

Aliases : PGSIP4

Description : plant glycogenin-like starch initiation protein 4

Gene families : OG0002672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002672_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G54940
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0026.g023444	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.39G020600.1	PGSIP2, GUX3,...	glucuronosyltransferase *(GUX) & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g21504	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01009501001	PGSIP3, GUX2	Cell...	0.03	OrthoFinder output from all 47 species
Len_g19254	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.04	OrthoFinder output from all 47 species
MA_8597011g0010	PGSIP2, GUX3	glucuronosyltransferase (GUX)	0.03	OrthoFinder output from all 47 species
Pir_g07503	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g02625	PGSIP2, GUX3	glucuronosyltransferase *(GUX) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	RCA	Interproscan
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015020	glucuronosyltransferase activity	IDA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISS	Interproscan
MF	GO:0016758	hexosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016301	kinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002495	Glyco_trans_8	388	473

External Links

No external refs found!

AT1G54940 (PGSIP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation