1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G54560

AT1G54560 (ATXIE, XIE)


Aliases : ATXIE, XIE

Description : Myosin family protein with Dil domain


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G54560

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00234900 XI-15, ATXI-I,... Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
Adi_g117107 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036557 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000056.26 ATXIG, XIG Myosin-13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre09.g416250 ATVIIIA, VIIIA Myosin-1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g15523 ATVIIIA, VIIIA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17314 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Gb_18084 ATXIE, XIE class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g29350.1 ATXIE, XIE,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
LOC_Os10g25560.1 XI-15, ATXI-I,... Protein OPAQUE1 OS=Zea mays (sp|k7u9n8|op1_maize : 552.0) 0.04 OrthoFinder output from all 47 species
LOC_Os10g25565.1 XI-15, ATXI-I,... class XI myosin microfilament-based motor protein 0.06 OrthoFinder output from all 47 species
Lfl_g04283 ATVIIIA, VIIIA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59954 XI-15, ATXI-I, XI-I class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Sam_g18055 No alias class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Solyc06g083960.3.1 XIC, ATXIC,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Solyc11g006220.2.1 ATXIE, XIE,... class XI myosin microfilament-based motor protein 0.04 OrthoFinder output from all 47 species
Zm00001e006446_P002 XI-8, XI-B, XIB,... class XI myosin microfilament-based motor protein 0.04 OrthoFinder output from all 47 species
Zm00001e036098_P002 ATXIE, XIE,... class XI myosin microfilament-based motor protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010584 pollen exine formation RCA Interproscan
CC GO:0016459 myosin complex ISS Interproscan
BP GO:0030036 actin cytoskeleton organization RCA Interproscan
BP GO:0030048 actin filament-based movement RCA Interproscan
BP GO:0030048 actin filament-based movement TAS Interproscan
BP GO:0051645 Golgi localization RCA Interproscan
BP GO:0051646 mitochondrion localization RCA Interproscan
BP GO:0060151 peroxisome localization RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004396 hexokinase activity IEP HCCA
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004630 phospholipase D activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP HCCA
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP HCCA
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 835 855
IPR000048 IQ_motif_EF-hand-BS 788 807
IPR001609 Myosin_head_motor_dom 67 723
IPR002710 Dilute_dom 1347 1451
IPR004009 Myosin_N 13 51
No external refs found!