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AT1G54540


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G54540

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271600 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00003p00244400 NHL25,... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00171p00061900 NHL25,... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.08 OrthoFinder output from all 47 species
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
AT2G35980 NHL10, YLS9, ATNHL10 Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
AT3G52460 No alias hydroxyproline-rich glycoprotein family protein 0.04 OrthoFinder output from all 47 species
AT3G52470 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
AT5G22200 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
Adi_g109010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02808 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03459 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40012 NHL10, YLS9, ATNHL10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06323 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25482 NHL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26954 NHL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01602 NHL10, YLS9, ATNHL10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05231.t2 Aspi01Gene05231 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05239.t1 Aspi01Gene05239 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05257.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05258.t2 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05261.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05262.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05265.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05268.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05269.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07845.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41312.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G004600.1 Ceric.03G004600 not classified & original description: pacid=50573018... 0.03 OrthoFinder output from all 47 species
Ceric.07G080900.1 Ceric.07G080900 not classified & original description: pacid=50627275... 0.03 OrthoFinder output from all 47 species
Ceric.09G050300.1 NHL25, Ceric.09G050300 not classified & original description: pacid=50587664... 0.03 OrthoFinder output from all 47 species
Ceric.16G075400.1 Ceric.16G075400 not classified & original description: pacid=50589266... 0.1 OrthoFinder output from all 47 species
Ceric.29G002200.1 Ceric.29G002200 not classified & original description: pacid=50624873... 0.04 OrthoFinder output from all 47 species
Ceric.29G073800.1 Ceric.29G073800 not classified & original description: pacid=50625140... 0.05 OrthoFinder output from all 47 species
Ceric.30G026800.1 Ceric.30G026800 not classified & original description: pacid=50609367... 0.04 OrthoFinder output from all 47 species
Ceric.30G026900.1 NHL25, Ceric.30G026900 not classified & original description: pacid=50608145... 0.04 OrthoFinder output from all 47 species
Ceric.35G052800.1 Ceric.35G052800 not classified & original description: pacid=50581572... 0.03 OrthoFinder output from all 47 species
Dac_g12219 NHL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06112 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09875 NHL10, YLS9, ATNHL10 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02072 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016858001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033199001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_01957 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_26587 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_26588 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_26590 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27157 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g39290.1 LOC_Os01g39290 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g64450.1 LOC_Os01g64450 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g64480.1 LOC_Os01g64480 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os02g33550.1 LOC_Os02g33550 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
LOC_Os04g33990.1 LOC_Os04g33990 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os04g58090.1 LOC_Os04g58090 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os04g58860.1 LOC_Os04g58860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os05g11010.1 LOC_Os05g11010 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g01220.1 LOC_Os08g01220 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
LOC_Os10g39970.1 LOC_Os10g39970 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g05860.1 LOC_Os11g05860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06260.1 LOC_Os12g06260 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g19832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_100525g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10432342g0020 NHL3 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_180376g0010 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_313447g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_44394g0020 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_467179g0010 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_63890g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_696598g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_740280g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_86810g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_9985g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g02160.1 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g19740.1 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g19340.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g12069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33043 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g21831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g25977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06486 NHL25 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g09779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g036480.1.1 NHL25, Solyc02g036480 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g080100.1.1 Solyc02g080100 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g081450.2.1 Solyc02g081450 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Solyc03g019920.1.1 Solyc03g019920 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.17 OrthoFinder output from all 47 species
Solyc03g081230.1.1 Solyc03g081230 NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g121620.1.1 Solyc03g121620 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc11g066490.1.1 Solyc11g066490 Uncharacterized protein At1g08160 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc11g069970.1.1 Solyc11g069970 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g00670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56346 NHL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12739 NHL3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002284_P001 Zm00001e002284 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e004504_P001 Zm00001e004504 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e008171_P001 Zm00001e008171 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e009221_P001 Zm00001e009221 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012610_P001 Zm00001e012610 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e014749_P001 Zm00001e014749 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e019181_P001 NHL3, Zm00001e019181 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e019498_P001 Zm00001e019498 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e020501_P001 Zm00001e020501 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025983_P001 Zm00001e025983 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e029112_P001 Zm00001e029112 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e035148_P001 Zm00001e035148 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e039408_P001 Zm00001e039408 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e040847_P001 Zm00001e040847 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e041977_P001 Zm00001e041977 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
MF GO:0009927 histidine phosphotransfer kinase activity IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
MF GO:0050734 hydroxycinnamoyltransferase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0052325 cell wall pectin biosynthetic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0080091 regulation of raffinose metabolic process IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 112 205
No external refs found!