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AT1G53790


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G53790

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G26510 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.06 OrthoFinder output from all 47 species
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G62510 No alias F-box family protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 279 405
IPR001810 F-box_dom 82 122
No external refs found!