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AT1G53340


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0007015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G53340
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT1G34480 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT1G61710 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT2G02640 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from all 47 species
AT2G13950 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT2G40050 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT3G50010 No alias Cysteine/Histidine-rich C1 domain family protein 0.08 OrthoFinder output from all 47 species
AT4G02540 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT4G10560 MEE53 Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT4G26380 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from all 47 species
AT5G48320 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT5G55770 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from all 47 species
AT5G55780 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005385 zinc ion transmembrane transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 220 264
IPR004146 DC1 161 208
IPR004146 DC1 357 405
IPR004146 DC1 274 321
No external refs found!