1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G53270

AT1G53270


Description : ABC-2 type transporter family protein


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G53270

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
AMTR_s00063p00178530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
AT3G55100 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT5G13580 No alias ABC-2 type transporter family protein 0.06 OrthoFinder output from all 47 species
Cba_g03340 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34793 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g38683 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01028809001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01032625001 No alias Solute transport.primary active transport.ABC... 0.09 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.11 OrthoFinder output from all 47 species
Gb_20468 No alias subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Len_g48614 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g50392 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
MA_529254g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Mp5g05620.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Nbi_g11905 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c8_17020V3.1 Pp3c8_17020 ABC-2 type transporter family protein 0.01 OrthoFinder output from all 47 species
Smo88976 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.16 OrthoFinder output from all 47 species
Solyc04g010200.1.1 Solyc04g010200 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc04g010210.1.1 Solyc04g010210 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Solyc07g062630.1.1 Solyc07g062630 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11561 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40098 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44760 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.09 OrthoFinder output from all 47 species
Zm00001e020032_P001 Zm00001e020032 lipid transporter (STR) 0.05 OrthoFinder output from all 47 species
Zm00001e020697_P001 Zm00001e020697 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.09 OrthoFinder output from all 47 species
Zm00001e036158_P002 Zm00001e036158 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e042020_P001 Zm00001e042020 ABC transporter G family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 51 201
IPR013525 ABC_2_trans 333 543
No external refs found!