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AT1G53250


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53800.1); Has 11909 Blast hits to 7704 proteins in 757 species: Archae - 51; Bacteria - 1338; Metazoa - 4550; Fungi - 987; Plants - 464; Viruses - 24; Other Eukaryotes - 4495 (source: NCBI BLink).


Gene families : OG0001730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G53250

Target Alias Description ECC score Gene Family Method Actions
Cba_g09085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006550_P001 Zm00001e006550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
BP GO:0009786 regulation of asymmetric cell division IEP HCCA
BP GO:0010374 stomatal complex development IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019897 extrinsic component of plasma membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
BP GO:0090558 plant epidermis development IEP HCCA
InterPro domains Description Start Stop
IPR003611 NUMOD3 103 133
IPR003611 NUMOD3 156 169
No external refs found!