AT1G53240 (mMDH1)

Aliases : mMDH1

Description : Lactate/malate dehydrogenase family protein

Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G53240

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00262600	MDH,...	Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Als_g06082	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.02	OrthoFinder output from all 47 species
Als_g21859	mMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.05	OrthoFinder output from all 47 species
Aspi01Gene69164.t1	PMDH1, Aspi01Gene69164	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g15037	mMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.02	OrthoFinder output from all 47 species
Cba_g38700	MDH	malate dehydrogenase component of AAA-ATPase motor...	0.03	OrthoFinder output from all 47 species
Ceric.16G039200.1	mMDH1, Ceric.16G039200	peroxisomal NAD-dependent malate dehydrogenase &...	0.1	OrthoFinder output from all 47 species
Ceric.28G009700.1	PMDH1, Ceric.28G009700	peroxisomal NAD-dependent malate dehydrogenase &...	0.02	OrthoFinder output from all 47 species
Cre03.g194850	MDH	Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
Cre12.g483950	mMDH1	Cellular respiration.tricarboxylic acid...	0.07	OrthoFinder output from all 47 species
Dcu_g03735	mMDH1	mitochondrial NAD-dependent malate dehydrogenase &...	0.06	OrthoFinder output from all 47 species
Dde_g06779	mMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.05	OrthoFinder output from all 47 species
GSVIVT01021185001	mMDH1	Cellular respiration.tricarboxylic acid...	0.06	OrthoFinder output from all 47 species
Gb_04596	MDH	malate dehydrogenase component of AAA-ATPase motor complex	0.07	OrthoFinder output from all 47 species
Gb_31581	mMDH1	mitochondrial NAD-dependent malate dehydrogenase	0.08	OrthoFinder output from all 47 species
LOC_Os01g46070.1	mMDH1, LOC_Os01g46070	mitochondrial NAD-dependent malate dehydrogenase	0.15	OrthoFinder output from all 47 species
LOC_Os12g43630.1	PMDH1, LOC_Os12g43630	peroxisomal NAD-dependent malate dehydrogenase	0.02	OrthoFinder output from all 47 species
Lfl_g06017	MDH	malate dehydrogenase component of AAA-ATPase motor...	0.07	OrthoFinder output from all 47 species
MA_10431009g0010	MDH	malate dehydrogenase component of AAA-ATPase motor complex	0.04	OrthoFinder output from all 47 species
MA_10431776g0020	PMDH1	peroxisomal NAD-dependent malate dehydrogenase	0.05	OrthoFinder output from all 47 species
MA_15580g0010	mMDH1	mitochondrial NAD-dependent malate dehydrogenase	0.07	OrthoFinder output from all 47 species
Mp5g19470.1	mMDH2	mitochondrial NAD-dependent malate dehydrogenase	0.13	OrthoFinder output from all 47 species
Mp7g08650.1	MDH	malate dehydrogenase component of AAA-ATPase motor complex	0.15	OrthoFinder output from all 47 species
Msp_g06714	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Nbi_g02729	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.02	OrthoFinder output from all 47 species
Nbi_g02886	MDH	malate dehydrogenase component of AAA-ATPase motor...	0.07	OrthoFinder output from all 47 species
Nbi_g04197	mMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.06	OrthoFinder output from all 47 species
Pir_g12090	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Ppi_g02813	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.02	OrthoFinder output from all 47 species
Ppi_g61921	MDH	malate dehydrogenase component of AAA-ATPase motor...	0.02	OrthoFinder output from all 47 species
Sam_g24048	No alias	malate dehydrogenase component of AAA-ATPase motor...	0.03	OrthoFinder output from all 47 species
Sam_g51178	No alias	malate dehydrogenase component of AAA-ATPase motor...	0.04	OrthoFinder output from all 47 species
Smo89860	mMDH1	Cellular respiration.tricarboxylic acid...	0.04	OrthoFinder output from all 47 species
Solyc03g115990.3.1	MDH, Solyc03g115990	malate dehydrogenase component of AAA-ATPase motor complex	0.13	OrthoFinder output from all 47 species
Solyc07g062650.4.1	mMDH1, Solyc07g062650	mitochondrial NAD-dependent malate dehydrogenase	0.2	OrthoFinder output from all 47 species
Spa_g09592	mMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.08	OrthoFinder output from all 47 species
Spa_g52195	mMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
Spa_g53075	MDH	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03287	MDH	malate dehydrogenase component of AAA-ATPase motor...	0.03	OrthoFinder output from all 47 species
Zm00001e020307_P002	mMDH1, Zm00001e020307	mitochondrial NAD-dependent malate dehydrogenase	0.13	OrthoFinder output from all 47 species
Zm00001e022459_P003	MDH, Zm00001e022459	malate dehydrogenase component of AAA-ATPase motor complex	0.04	OrthoFinder output from all 47 species
Zm00001e026586_P002	mMDH1, Zm00001e026586	Malate dehydrogenase 2, mitochondrial OS=Arabidopsis...	0.09	OrthoFinder output from all 47 species
Zm00001e032495_P001	mMDH1, Zm00001e032495	mitochondrial NAD-dependent malate dehydrogenase	0.08	OrthoFinder output from all 47 species
Zm00001e035622_P001	MDH, Zm00001e035622	Malate dehydrogenase, chloroplastic OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006094	gluconeogenesis	RCA	Interproscan
BP	GO:0006096	glycolytic process	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006165	nucleoside diphosphate phosphorylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006757	ATP generation from ADP	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006833	water transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	RCA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007030	Golgi organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009132	nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009135	purine nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009185	ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	RCA	Interproscan
BP	GO:0009409	response to cold	IEP	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016615	malate dehydrogenase activity	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0017014	protein nitrosylation	None	Extended
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IDA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018198	peptidyl-cysteine modification	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019319	hexose biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030060	L-malate dehydrogenase activity	IMP	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042044	fluid transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IEP	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046031	ADP metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046364	monosaccharide biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0046686	response to cadmium ion	RCA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0046939	nucleotide phosphorylation	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)	IEP	HCCA
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	HCCA
MF	GO:0003727	single-stranded RNA binding	IEP	HCCA
MF	GO:0004618	phosphoglycerate kinase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	HCCA
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	HCCA
MF	GO:0005347	ATP transmembrane transporter activity	IEP	HCCA
MF	GO:0005452	solute:inorganic anion antiporter activity	IEP	HCCA
MF	GO:0005471	ATP:ADP antiporter activity	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
CC	GO:0005740	mitochondrial envelope	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	HCCA
CC	GO:0005753	mitochondrial proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006862	nucleotide transport	IEP	HCCA
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	HCCA
MF	GO:0008187	poly-pyrimidine tract binding	IEP	HCCA
MF	GO:0008266	poly(U) RNA binding	IEP	HCCA
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009528	plastid inner membrane	IEP	HCCA
BP	GO:0009853	photorespiration	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015114	phosphate ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015120	phosphoglycerate transmembrane transporter activity	IEP	HCCA
MF	GO:0015121	phosphoenolpyruvate:phosphate antiporter activity	IEP	HCCA
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	HCCA
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	HCCA
MF	GO:0015217	ADP transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0015315	organophosphate:inorganic phosphate antiporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015355	secondary active monocarboxylate transmembrane transporter activity	IEP	HCCA
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015713	phosphoglycerate transmembrane transport	IEP	HCCA
BP	GO:0015714	phosphoenolpyruvate transport	IEP	HCCA
BP	GO:0015718	monocarboxylic acid transport	IEP	HCCA
BP	GO:0015748	organophosphate ester transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0015865	purine nucleotide transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
CC	GO:0030964	NADH dehydrogenase complex	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
BP	GO:0042873	aldonate transmembrane transport	IEP	HCCA
MF	GO:0042879	aldonate transmembrane transporter activity	IEP	HCCA
BP	GO:0043094	cellular metabolic compound salvage	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
CC	GO:0045259	proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	HCCA
CC	GO:0045271	respiratory chain complex I	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0046685	response to arsenic-containing substance	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
MF	GO:0089721	phosphoenolpyruvate transmembrane transporter activity	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001236	Lactate/malate_DH_N	31	173
IPR022383	Lactate/malate_DH_C	175	338

External Links

No external refs found!

AT1G53240 (mMDH1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation