AT1G53023

Description : Ubiquitin-conjugating enzyme family protein

Gene families : OG0001231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G53023
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
AT1G53025	No alias	Ubiquitin-conjugating enzyme family protein	0.08	OrthoFinder output from all 47 species
Dcu_g13320	PFU2, UBC23	E2 ubiquitin-conjugating protein *(PHO2) & original...	0.02	OrthoFinder output from all 47 species
Gb_38611	UBC24, PHO2, ATUBC24	Probable ubiquitin-conjugating enzyme E2 24...	0.02	OrthoFinder output from all 47 species
Solyc01g079290.1.1	ATUBC11, UBC11,...	Probable ubiquitin-conjugating enzyme E2 24...	0.06	OrthoFinder output from all 47 species
Solyc02g078210.3.1	UBC24, PHO2,...	ubiquitin-conjugating E2 protein (PHO2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009846	pollen germination	IEP	HCCA
CC	GO:0022625	cytosolic large ribosomal subunit	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000608	UBQ-conjugat_E2	62	208

External Links

No external refs found!